KEGG   Desulfovibrio gigas: DGI_2874Help
Entry
DGI_2874          CDS       T02851                                 

Definition
putative formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dgg  Desulfovibrio gigas
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dgg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    DGI_2874
Enzymes [BR:dgg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     DGI_2874
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DGI_2874
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3019457..3020281)
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETIARGLRPALEGRGIVSLDIRHAGSVRGGLDAKTLAATVPGRRILAVSRRAK
LLLLTLSDDLILAFHLKMTGRLHLPAPDELPDRHTHLIFHLDNGGRLFFMDMRKFGYCAA
LTAGQLQAFPFYAALGPEPLETSPEDLAGRLKGRRGRIKALLLDQTVLAGVGNIYADEAL
FRAGLRPDAPADAVSASRKIGLMTHVRAVLQEGIDSCGASIRNYVDARGDAGAFQNTFNV
YGRAGQPCPRCAASLEKMTVAGRTSTFCPRCQHG
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagctgcccgaggtcgaaaccatcgcccgcggcctgcgaccggcgctggagggc
aggggcatcgtttcgctggacatccgccatgccggctcggtgcgcggcgggctggatgcc
aagaccctggctgcaaccgtgccgggccggcgcatcctggccgtcagccgccgggccaag
ctgctgctgctcacgctttctgacgatctgatcctcgccttccacctcaagatgaccggc
cgtttgcacctgccggccccggatgagctgccggacaggcacacgcatctgatcttccac
ctggacaacggcggccggctgttcttcatggacatgcgcaaattcggctactgcgccgcc
ctgactgccggacagttgcaggcgttcccgttctatgcggccctgggtcccgagccgttg
gagacatcgccggaagatctggccggccggctgaagggtcggcgcggtcgcatcaaggcc
ttgctgctggatcagaccgtgctggccggggtggggaacatctatgcggacgaggccctg
ttccgggccggcctgcggccggatgcgccggcggatgcggtctcggcctccaggaaaatc
gggttgatgacgcatgttcgcgccgtgctgcaggaagggatcgacagctgcggggccagc
atccgcaattacgtcgatgcccgcggcgatgccggcgcgtttcagaataccttcaatgtc
tacggtcgggccggccagccctgcccgcgttgcgccgcctcgttggaaaagatgaccgtg
gccggccgcaccagcactttctgcccccgctgccagcacggttga

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