KEGG   Megalodesulfovibrio gigas: DGI_3212
Entry
DGI_3212          CDS       T02851                                 
Symbol
trmU
Name
(GenBank) putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
dgg  Megalodesulfovibrio gigas
Pathway
dgg04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:dgg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    DGI_3212 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dgg03016]
    DGI_3212 (trmU)
Enzymes [BR:dgg01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     DGI_3212 (trmU)
Transfer RNA biogenesis [BR:dgg03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    DGI_3212 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C NAD_synthase ATP_bind_3 QueC PUA_3
Other DBs
NCBI-ProteinID: AGW14916
UniProt: T2GFK2
Position
3373402..3374499
AA seq 365 aa
MPAGRVAVAVSGGMDSLLALALLADAGQAVCAVHGIFFPQTEATRRRSEALAALCHRLGV
AFVEADLVTAFRERVIQPFIDDYLHGRTPNPCAGCNARIKFGLLLDHALAAGADVLATGH
YARQGMDAGRPCLRKGADPAKDQSYFLSLVPLDRLARARFPLDGWRKADVPAALAARGLT
PPESRESQEICFIPDDDYRAFLRANAPRPGDSQGGRLGGPGPILLEGPERIRVGTHQGLW
AYTPGQRRGLGVAHSEPLFVLGKDQRGNALLVGPRESSFSPRCVAAACNLLVPCEEWPEV
ILARTRYRQVEQPARWRMEQGRLILDFQTPQPLPAPGQVAAVYDAQGRVLAGGVIEESPQ
GGCNA
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcccgccggccgcgtggccgtggccgtgagcggcggcatggacagcctcctggccctg
gccctgctggcggatgccggccaggccgtctgcgccgtgcatggcatcttttttccgcag
accgaggccacccgccgccgcagcgaggcgctggcagccctgtgccaccgtctgggcgtg
gcctttgtggaagccgatctggtgacggcgttccgggagcgcgtcatccagccgttcatt
gacgactacctccacggccgcacccccaacccctgcgccggctgcaatgcgcgcatcaag
ttcggcctgctgctggatcacgccctggcggccggcgcggacgtcctggccaccggacac
tatgcccgccaagggatggatgcgggccggccctgcctgcgcaagggcgcggatccggca
aaggatcagagctatttcctctccctggtgccgctggaccgtctggcccgggcgcgcttt
cccctggatggctggcgcaaggcggacgtgcccgccgccctggccgcccggggcctgacg
ccgccggaatcccgcgaaagccaggaaatctgtttcatccccgatgacgattaccgcgcc
tttctgcgcgccaacgccccccgcccgggtgacagccagggtggccgcctgggtggccca
ggccccatcctgctggagggaccggagcggatccgcgtggggacgcatcagggcctgtgg
gcctacacgccgggccaacgccgcggcctgggcgtggcccacagcgagccgctcttcgtc
ctgggcaaggaccaacgcggcaacgccctgctggtgggaccgcgggagtcgtccttcagc
ccccgctgtgtggccgccgcctgcaacctcctggttccctgcgaggaatggcccgaagtc
atcctggcccgcacccgctaccggcaggtggagcagccggcccgctggcgcatggaacag
ggcagactgatcctggacttccagacgccgcaaccgttgcccgcgccgggccaggtggcc
gcggtgtacgacgcccaaggccgcgtgctggccggcggcgtcattgaggaatcgccccag
ggaggctgcaatgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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