KEGG   Desulfoscipio gibsoniae: Desgi_0064
Entry
Desgi_0064        CDS       T02657                                 
Name
(GenBank) DNA polymerase III, subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
dgi  Desulfoscipio gibsoniae
Pathway
dgi03030  DNA replication
dgi03430  Mismatch repair
dgi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Desgi_0064
   03430 Mismatch repair
    Desgi_0064
   03440 Homologous recombination
    Desgi_0064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dgi03032]
    Desgi_0064
   03400 DNA repair and recombination proteins [BR:dgi03400]
    Desgi_0064
Enzymes [BR:dgi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Desgi_0064
DNA replication proteins [BR:dgi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Desgi_0064
DNA repair and recombination proteins [BR:dgi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Desgi_0064
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_5 AAA_30 AAA_22 AAA_19 AAA_7 TIP49 AAA_assoc_2 Mg_chelatase Rad17 AAA_16 HTH_SUN2 DUF815 AAA_2 AAA_18 RNA_helicase AAA_14 nSTAND3
Other DBs
NCBI-ProteinID: AGK99680
UniProt: R4KJ68
Position
51504..53456
AA seq 650 aa
MVSYLALYRQWRPQQLGELVGQKHVTETLRNALIAGKVSHAYLFCGPRGTGKTSTAKILA
RAINCSEQHEGEPCNRCRNCREIMSGATMDVIEIDAASNRGIDEIRELKENIKFFPSLGS
KRIYIVDEVHMLTNEAFNALLKTLEEPPGHVVFVLATTEPHKVPLTILSRCQRFDFRPIP
EELIAKRLEQVVARSNFDVDGEAVQAITRAAGGSMRDALSVLDQALLLSGETAVTADTVH
SILGTVAEDVLFGLATGLAVKKAAGVLRQVAEIVAAGKDLQQLVKELTEYLRRLLVVFLA
PEGTGEAGFNMPPAELLQLFTRDRLIRAIDHLVEAEQVMRRSVHPRVVLELALVRVMDDD
PPPVDELLHRIERLEKALANGEHRGMCEGQSYSNNEPVKDISAVQSNNQPPLKSTTVNAK
VQAGFQIDGKQPKMGNTKANPTASPVCGASDDTATDSQVFQKINNNSPVPGPETSHANDT
ELVHVPAGESNGSELQAIKTAPLKNTGIIMAEDPVQRKTGKNDTQDDPRYSIDQINKWWP
EIMAVVKKANPVAYTCLCQVWPAEIKEHRLVLGVPLGDVFIKNMAEDPGTKQLLTQTLNS
ITRLTWQIRCDFYDAPPPGWRRNAEQLDTAEAISLFQGAEVPLEKDLDKK
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggtgagttatctggccttgtaccggcagtggcgtccgcagcaattgggtgaactggtg
ggacaaaagcacgttacagagacgctgcgcaatgcattgatagccggcaaagtgagccac
gcttatttattttgcgggccacggggtaccggcaagacaagcacggccaagatactggcc
cgggctattaactgctccgaacaacacgagggtgagccgtgcaaccggtgccgaaattgc
cgggaaataatgtccggtgccaccatggatgtaattgaaattgatgctgcctccaaccgg
ggtattgatgaaatacgtgagctgaaggagaatataaaattttttccttcactgggtagt
aagcggatatacatagtggatgaagtgcatatgctcaccaatgaggcttttaatgccctg
ttgaaaacactggaagaaccacctggccatgtggtatttgtgcttgctaccacagagccg
cataaagtgcccctgaccatactgtcacgctgccagcgttttgattttcgtcccattccg
gaagaattaattgccaaacgcctggaacaagtggtcgccagaagtaattttgacgtggat
ggggaggctgtacaggctatcacccgggctgccggaggcagtatgcgggatgctttgagt
gtattggaccaggcgcttttgctcagtggggaaactgccgttactgctgatacggtgcac
agtattttaggtacggtggccgaagatgtgctgtttggtctggccaccgggctggcggta
aaaaaagcggctggtgtattaaggcaggtggctgaaattgttgccgcgggtaaggattta
cagcagttggttaaggaattaacggaatatctgcgcaggctgctggtggtatttttagct
cccgaagggacgggggaagcagggtttaatatgcccccggcagagttattgcagctgttt
acacgcgaccggttaatcagggctattgaccacctggtggaggccgagcaggttatgcgc
cgcagtgtccacccaagggtagtgctggagttggcgcttgtgcgggttatggatgatgat
ccgccgccggtggatgaactgctgcataggattgagcgacttgaaaaagcgctggccaat
ggtgaacatcggggaatgtgcgaggggcaatcatatagtaataatgagcccgtgaaggat
atttcggcagtacaaagcaataatcaaccaccacttaaatctacgacagtgaatgcaaaa
gtccaggccggcttccaaattgatggtaagcagcctaaaatgggtaatactaaagctaat
ccaactgcttcaccggtttgtggtgcttcggatgatacggccaccgattcgcaggtgttc
caaaaaatcaataataattcgcccgtgcccgggccggagacgtcacatgctaatgatact
gaactggtgcacgtgcccgccggagaatctaatgggtcggaattacaggcaattaaaaca
gccccattgaaaaataccggtattattatggcagaagaccctgttcagaggaaaaccggg
aagaatgatactcaagatgatccccgttatagtatagaccaaattaataaatggtggccg
gaaataatggcggtggttaaaaaagccaacccggttgcctatacctgtttatgccaggta
tggcctgcggaaataaaagagcaccgtttggtgttgggtgtgcccctgggagatgttttt
ataaagaatatggctgaggatcctggtaccaagcagttgttgacccaaacactgaattca
ataacccgattaacctggcagatacgctgcgatttctatgatgccccgccgccaggctgg
cggaggaacgcggaacagctggatactgcagaggcgataagcctgtttcagggtgcagag
gtgcccctggaaaaggatttggataaaaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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