KEGG   Debaryomyces hansenii: DEHA2B12122g
Entry
DEHA2B12122g      CDS       T01026                                 
Name
(RefSeq) DEHA2B12122p
  KO
K12881  THO complex subunit 4
Organism
dha  Debaryomyces hansenii
Pathway
dha03013  Nucleocytoplasmic transport
dha03015  mRNA surveillance pathway
dha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DEHA2B12122g
  09122 Translation
   03013 Nucleocytoplasmic transport
    DEHA2B12122g
   03015 mRNA surveillance pathway
    DEHA2B12122g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dha03019]
    DEHA2B12122g
   03041 Spliceosome [BR:dha03041]
    DEHA2B12122g
Messenger RNA biogenesis [BR:dha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     DEHA2B12122g
    TREX complex
     DEHA2B12122g
Spliceosome [BR:dha03041]
 Complex C
  Other components
   EJC/TREX
    DEHA2B12122g
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    DEHA2B12122g
SSDB
Motif
Pfam: FoP_duplication RRM_1
Other DBs
NCBI-GeneID: 2913432
NCBI-ProteinID: XP_457481
UniProt: Q6BWD8
Position
B:join(950350..950460,950517..951170)
AA seq 254 aa
MSNPILEKSLDEIIGEKKPAKKFPNGPKRGNSRINKPHQRPKGPHGRNDRPRPSSSVPRE
VTAISKSKPILRVKNIHPDLNGEDLSNLFDGVAPVEFVKFDPRKDDVAYVCFQYDHNKNN
SIAISKFDGRKAMGENLVVESATSLADRIVAPRGNPRGPRNAAPGGPGGKPQNPLKRKQK
PQKKSVDTLDEELSAYMSGKSEGELKRESKVNKLDDEMDSYWSNKNENDSNAAKENSNAN
VNQPDDTADEMKLD
NT seq 765 nt   +upstreamnt  +downstreamnt
atgtctaatcctatattggaaaaatcgttagatgaaatcattggcgaaaaaaagccagca
aaaaaatttccaaatgggccaaaaagaggtaactctagaatcaataaaccacatcaaaga
ccaaaaggtccacacggaagaaatgataggccaagaccttcgagttcggttccaagagaa
gttacagctatttctaagtcaaagcctattcttagagtcaagaatattcacccagatttg
aatggggaagatttatccaacttattcgatggtgtcgctccggtcgaatttgttaaattt
gatcctagaaaggatgatgttgcatatgtctgtttccaatacgatcataataaaaataac
tccatagccatctcgaaattcgatggaagaaaagctatgggtgagaatttggtcgtagaa
agtgccacgtcgttagcagaccgtatagtcgctcctaggggaaatccaagaggcccaaga
aatgctgctcctggagggcctggagggaaaccacagaatccattgaagagaaaacaaaag
ccccaaaagaagtcggttgatacattggatgaagagctttcagcttacatgtctggtaag
agtgaaggggaattgaaaagagaatcgaaagtaaacaagcttgacgacgaaatggatagt
tattggagcaacaagaatgaaaatgattctaatgcagcaaaggagaattctaatgcaaac
gttaatcaacctgatgatacagcagacgaaatgaaattggattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (43)   

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