KEGG   Debaryomyces hansenii: DEHA2D18722g
Entry
DEHA2D18722g      CDS       T01026                                 
Name
(RefSeq) DEHA2D18722p
  KO
K10756  replication factor C subunit 3/5
Organism
dha  Debaryomyces hansenii
Pathway
dha03030  DNA replication
dha03410  Base excision repair
dha03420  Nucleotide excision repair
dha03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DEHA2D18722g
   03410 Base excision repair
    DEHA2D18722g
   03420 Nucleotide excision repair
    DEHA2D18722g
   03430 Mismatch repair
    DEHA2D18722g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dha03032]
    DEHA2D18722g
   03036 Chromosome and associated proteins [BR:dha03036]
    DEHA2D18722g
   03400 DNA repair and recombination proteins [BR:dha03400]
    DEHA2D18722g
DNA replication proteins [BR:dha03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    DEHA2D18722g
  DNA Replication Termination Factors
   ELG1-RFC complex
    DEHA2D18722g
Chromosome and associated proteins [BR:dha03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    DEHA2D18722g
DNA repair and recombination proteins [BR:dha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     DEHA2D18722g
  Check point factors
   HRAD17(Rad24)-RFC complex
    DEHA2D18722g
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 Rad17 RuvB_N Mg_chelatase AAA_11 AAA_19 AAA_16 HCO3_cotransp AAA_24 KCNQ2_u3
Other DBs
NCBI-GeneID: 8998580
NCBI-ProteinID: XP_002770358
UniProt: B5RTM7
Position
D:complement(1540384..1541478)
AA seq 364 aa
MSLWVDKYRPKSLEQLSYHESITQNLAALASTGDFPHLLVYGPPGSGKKTRIYCTLHELF
GPQVEKLKIDVKVFTTSSNRKLEFNVLSSPYHLEITPSDMGNNDRVVIQDLLKDVASTEQ
VDFSNQSKSASKHRFKVVIINEADSLSRDAQAALRRTMEKYSANIRIIMICNTTSNIISP
IKSRTLLVRIPAPSHKEISNILSNIADKESVKFNPSNESKKQEFFDKVSKNSDSNLRKAL
LCFETISMQSESIAINNTDSAMIALDWEVIIQNLAKSIISNRTVANLAKVRVVFYELLSH
CIPPRIILKKLLFNLIEVSNSNESITQSLVEIGAVFDERLSLGQKSIFHLEGFVAKSMVA
LEKQ
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgtccttgtgggttgataaatacagacctaaaagtttggagcaattgtcgtatcatgaa
tcaatcacacaaaatctagctgctttggcaagtacaggagattttccacatttactagtt
tatggacctccaggtagtggtaagaagacaagaatttactgtactttacatgaattattt
ggaccgcaagtagagaaattgaaaattgatgtgaaagtgtttactacttcttcaaataga
aaattagaattcaatgttttaagttcaccttatcatttagagatcacaccttctgacatg
ggaaacaatgacagagttgtaattcaagatttattgaaagatgttgcatcaacagaacaa
gtggatttcagtaaccaatctaagtctgcttcaaagcataggtttaaagttgttataata
aatgaagcagattcgttaagtagagatgcacaggcagctttgagaagaacgatggaaaaa
tactccgccaatatcagaataattatgatatgtaatacaacatctaacatcatatcgcca
attaaatcaagaacattgttagtaagaatacctgcaccatctcataaagaaatcagcaat
attctatcgaacatagccgataaggagtcagttaaatttaatccttctaatgaatcaaag
aagcaagaattcttcgacaaggtatctaaaaactcagactctaatttgagaaaagcttta
ttatgctttgaaactattctgatgcaaagtgaactgatcgcgattaataatacagacctg
gcgatgattgcattggattgggaagtaattattcaaaatttggctaaatctattatatca
aatagaacagtcgctaatctcgctaaagtaagagtagtattttatgaattgttatcccat
tgtattcctcctagaattattttgaagaagctattatttaacttgattgaagtatctaac
agcaacgaatctataactcagagcctagttgaaatcggtgcagtatttgatgaacggttg
agcttaggacagaagagtatatttcatttggagggttttgttgctaaatctatggttgca
ttggaaaagcaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (44)   

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