KEGG   Debaryomyces hansenii: DEHA2E16170g
Entry
DEHA2E16170g      CDS       T01026                                 
Name
(RefSeq) DEHA2E16170p
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
dha  Debaryomyces hansenii
Brite
KEGG Orthology (KO) [BR:dha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dha03016]
    DEHA2E16170g
Enzymes [BR:dha01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     DEHA2E16170g
Transfer RNA biogenesis [BR:dha03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    DEHA2E16170g
SSDB
Motif
Pfam: tRNA_int_endo
Other DBs
NCBI-GeneID: 2902431
NCBI-ProteinID: XP_460005
UniProt: Q6BP65
Position
E:complement(1313730..1314839)
AA seq 369 aa
MGKRNRVNNNQIYANALPIILSTDEYGRLPQIYPHNPVSWIYFAYQYLSIQARTVPQLRT
KPFKVDYEDGVFKVNDEEDMRNLWKQGFFGKGTLSRSDPSWKTRTNRRLNLDEDLDITSE
EITRMRREERKKFKTERSKLQDLELKQRQNNISNAELQTLEEVRQSLNVSRLENPNYNQA
LTQLEALRIEDQNIIHDGTLLDLEYLQLQKTEVFFLRFALNVINIDLSLSQLFSECCERD
ISPNNSFILEYVVYHHYRSLGWCVRSGIKFGCDMLLYKRGPPFSHAEHAILIMSDSHHDW
SSISSISRVIGGVKKNLVLTFIDGPTTEEFDAVVNSSYSCANEKLYNIFKLYKITEILYR
RWIPSRNRD
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgggaaaacgaaacagagtaaataacaatcaaatatatgccaatgctttgcccataata
ttatctaccgatgagtatgggaggttacctcagatatatccgcataatccagtgtcgtgg
atatattttgcatatcagtatttgagtatacaggccagaacagtacctcaattgcgtacc
aaaccattcaaggtagactatgaagatggggtgtttaaagttaatgatgaggaggatatg
cgaaacttgtggaaacaaggtttttttggcaaaggaacattgtctagatcagatccgtca
tggaagactaggaccaacaggagattgaacctcgatgaagacttggatatcacgagtgaa
gagattacaagaatgagaagagaagagagaaagaagttcaagacagaaagaagcaaattg
caggatttggagctaaagcaacgacaaaacaacatttcgaatgctgagttacaaacctta
gaagaagtccgtcaaagtttgaatgtgctgaggctcgaaaaccctaactacaaccaggcg
ttgacccagttagaggcccttaggatcgaggaccagaacatcattcacgatggcaccctc
ttggacctcgaatatttgcagttgcagaaaactgaggtgtttttcttacgtttcgccctc
aatgtcatcaacattgatttgtcgctctcacaactcttttctgaatgctgtgaacgcgac
atttcgccaaacaactcgtttattctcgaatacgtcgtctaccaccattacaggtctttg
ggatggtgtgtgaggtctggaataaagtttggttgcgatatgttgctctacaaaaggggc
cctcccttcagccacgccgaacatgcgattctaataatgtcggacagccaccacgactgg
tccagtatctcttctatatcgcgggtcataggtggtgtcaaaaaaaaccttgtgttaaca
tttattgatggtcctacgaccgaagaattcgatgcggttgttaactcatcctattcatgc
gccaacgaaaaattgtataatatattcaagctctacaagataacggaaatactatataga
agatggattccaagtcgaaacagagattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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