KEGG   Debaryomyces hansenii: DEHA2G22902g
Entry
DEHA2G22902g      CDS       T01026                                 
Name
(RefSeq) DEHA2G22902p
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
dha  Debaryomyces hansenii
Pathway
dha03020  RNA polymerase
dha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DEHA2G22902g
  09124 Replication and repair
   03420 Nucleotide excision repair
    DEHA2G22902g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dha03021]
    DEHA2G22902g
   03400 DNA repair and recombination proteins [BR:dha03400]
    DEHA2G22902g
Transcription machinery [BR:dha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DEHA2G22902g
  RNA polymerase III system
   RNA polymerase III
     DEHA2G22902g
  RNA polymerase I system
   RNA polymerase I
     DEHA2G22902g
DNA repair and recombination proteins [BR:dha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DEHA2G22902g
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 8999290
NCBI-ProteinID: XP_002777720
UniProt: B5RUY9
Position
G:1859470..1859916
AA seq 148 aa
MSGILFEDMFNVDSVDSARYNKVSRITGQSSTSQDIKITLDINSELFPVRDNDSLTIMLA
SSLGNESSMLTSNGSWRPPKSNDRSLADDYDYVMYGTVYKFEENSNNDKMSVYISFGGLL
MCLEGGYRSLSNLKQENAYILIRHFKDN
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtcaggcattttatttgaagacatgttcaatgtcgattctgttgattcagcaagatac
aacaaagtttcccgtataacagggcaatcttctacctcacaagacatcaagattaccttg
gacataaatagtgaattattccccgtcagagataatgattcattaaccattatgttagca
tcatctttgggtaatgaatcatcgatgttgacttctaatggatcgtggagaccaccaaag
agcaatgatagatccctcgctgatgattacgattatgttatgtacggaactgtttacaaa
tttgaagaaaactcaaacaatgataaaatgtcggtgtatatttcattcggtggattatta
atgtgtttagaaggtggataccgttctttatctaacttgaagcaagagaatgcctacatt
ttaattcgtcattttaaggataattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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