KEGG T00822: Dhaf

Desulfitobacterium hafniense DCB-2: Dhaf_0005

Entry

Dhaf_0005         CDS       T00822

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

dhd Desulfitobacterium hafniense DCB-2

Brite

KEGG Orthology (KO) [BR:dhd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dhd03032]
    Dhaf_0005
   03400 DNA repair and recombination proteins [BR:dhd03400]
    Dhaf_0005
Enzymes [BR:dhd01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Dhaf_0005
DNA replication proteins [BR:dhd03032]
Prokaryotic type
  DNA Topoisomerases
   Dhaf_0005
DNA repair and recombination proteins [BR:dhd03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Dhaf_0005

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook

Other DBs

NCBI-ProteinID:

ACL18075

UniProt:

B8FXX0

Position

4326..6260

AA seq 644 aa
MQEKAEIKETIPTNDYNAGQIEVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDE
ALAGYCDTIEVTIHKDNSISVVDNGRGIPVDIHPKLGKPAVEVALTVLHAGGKFSGSAYK
VSGGLHGVGMSVVNALSTWLHVEVRKDGNIYHQEFMRGKTKTELAVIGQVDPNQTGTTIT
FSPDPEIFEDTVFLFDTLAHRLRELSFLNKKVSITLIDAREDKKEVYYHTGGIYDFVKYI
NRSKESLHPEPIYFEAEKDGVQVEVSMQYNDGYVENLFSYANNIHTHEGGTHESGFKAAL
TRVANDYARKNNILKANEANLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEIRSIV
DSITGEGLSAFFEENPAIGKKVIEKSIQASRAREAARKARELTRRKSALEVSALPGKLAD
CSWKEAELCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDRILGNAEIRA
MITAMGTGISEDFDIEKARYHKLVIMTDADVDGAHIRILLLTFFFRYMKPLLENNYVYIA
QPPLFKVKKGKDIHYVYSNEELAKLQDEIGRDRVEIQRYKGLGEMNAEQLWETTMDPAKR
TILQVTMEDAIKADELFTILMGDVVEPRREFIQDNAQYVRNLDV

NT seq 1935 nt +upstreamnt +downstreamnt
ttgcaagaaaaagccgaaatcaaggagactattccaaccaatgattataatgcagggcag
attgaggtccttgaaggtttagaagcggtcagaaaaagaccggggatgtatatcggttcc
acaagtctgcgcggtttgcatcatttggtctatgaaatcgtggataatagtatcgacgag
gctttggccggttactgcgataccattgaagtcacgatccataaagataacagcatctcc
gtggtggataatggccgggggattccggtggatattcatcctaaattaggcaagccggct
gttgaggtggctttaacggtgctccatgccggaggaaaattcagcggcagcgcttataaa
gtatccgggggactccacggcgtggggatgagcgtggtcaatgctttatccacctggctc
catgtggaggtcaggaaagacgggaatatttatcatcaggagtttatgcggggtaaaacc
aagacagaactggcggtgattggtcaggtggatcccaatcagaccggaaccaccattacc
ttttctcccgatccggaaattttcgaggataccgtgttcctctttgatactttagctcac
cgtcttcgtgaactttctttcttgaataaaaaggtatcgattaccttgatcgatgccaga
gaagacaagaaagaagtttactatcataccggcggcatctacgattttgtcaagtatatc
aaccgttccaaagaatctcttcatcctgaacccatttactttgaagcagaaaaggatggg
gtccaggttgaagtatccatgcaatataatgacggctatgtggaaaatcttttttcttat
gccaataatattcatacccatgaagggggcacccacgaatccggctttaaagcggctctg
acccgggtggccaatgattatgcccggaaaaacaatatcctgaaagccaacgaagccaac
ctatcgggagaagatatccgggaaggtttgaccgccgtgatctcggtaaaagttcctgaa
ccccagttcgaaggtcaaaccaagaccaagttggggaattcggaaattcgttcgattgtg
gattccatcaccggagaaggcttatcggcgttttttgaggaaaaccccgccataggcaag
aaagtcattgaaaaatccattcaggcttcccgggcccgggaagcagcccgcaaagccagg
gaattaacccggcgcaaaagcgctctggaagtcagcgctttgccggggaaattagccgat
tgctcctggaaagaagcagagctttgtgagatgtatatcgtggagggtgacagtgcggga
ggttcggccaagcaaggccgggatcgtcgttttcaggctattctgcccctgcgcggcaaa
attctcaatgtggaaaaagcccgtttggatcggattttaggcaatgctgagatcagagcc
atgatcacagccatgggtacggggatttccgaggattttgatattgaaaaagcccgctat
cataaattagtgatcatgaccgatgccgatgtggatggtgctcatatccggattttgctc
ctgaccttcttcttccgctatatgaagcctttgcttgagaacaattatgtctatattgcc
cagccccctctgtttaaagtgaagaaggggaaggatatccattatgtctacagcaatgaa
gagttagccaagctgcaggatgagatcggccgcgatcgggtggaaattcagcgctacaaa
ggtttaggggaaatgaatgcggaacagctttgggaaaccactatggatccggccaaaaga
actattctgcaggtgaccatggaagatgccattaaagcggacgagctctttaccattctc
atgggtgatgtggtggaaccaaggcgtgaattcatccaggataatgcacaatatgtccgt
aatctggacgtctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system