KEGG   Desulfitobacterium hafniense DCB-2: Dhaf_1266Help
Entry
Dhaf_1266         CDS       T00822                                 

Definition
(GenBank) DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dhd  Desulfitobacterium hafniense DCB-2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dhd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Dhaf_1266
Enzymes [BR:dhd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Dhaf_1266
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dhaf_1266
DNA repair and recombination proteins [BR:dhd03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Dhaf_1266
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
1363877..1364695
Genome map
AA seq 272 aa AA seqDB search
MPEIPEMETYKNYLQLSVLDKRIVGTEITRARSTNVPTDEFVRWVQDTSIEQVLRYGKYL
ILALSSGKALCAHMMLDGRMYYEVAGEPVELPGRSHIRLKFADHSILHFCDLRLGYLKLL
APSQVDAIKEGLGLDPLDAEFSLAAFLNILSGKRGMIKPLLMDQKNISGIGNAYSNEILF
AAGILPERKTPTLTDGERDRLYGVIPDLLQQAIAKGGYIEEPFASWDKLSGGMIPYFKVY
DRTGQPCLQCGEPIKQKTVGGRNAYYCLTCQH
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgccggaaattcctgaaatggaaacgtacaagaattatttacagctatccgtccttgat
aagagaattgtgggaaccgaaatcaccagggcgcgcagcaccaatgttcctaccgatgag
tttgtgagatgggtgcaggatacaagtattgagcaggtgttaagatatgggaaatacctc
atccttgccctgagctcagggaaagccctctgcgctcatatgatgcttgatggcagaatg
tattatgaagtggcgggagaacctgtagaattgccgggcagatcccatatccggctgaag
tttgccgatcactccattctccatttttgcgacttaagattaggttaccttaagctgctc
gcgccatcccaggtggacgctatcaaggaagggctgggtcttgatcctttggatgcggag
ttttccttggccgcttttttgaatatccttagcgggaaaagaggcatgattaagcctctg
ctcatggatcaaaaaaacatatcaggcataggcaacgcctattccaacgagattttattt
gccgcgggaatactgccggaacgcaaaacccccaccttaaccgatggggagagggatcgg
ctgtatggggtcatccctgatttgcttcagcaagcgattgccaaagggggatatatcgaa
gagccctttgcctcctgggataagttaagcggaggaatgattccgtattttaaggtttat
gatcgcacgggacagccttgccttcaatgtggtgagcccataaagcaaaagacagttggc
ggcaggaatgcttattattgtttaacctgccagcactaa

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