KEGG   Desulfitobacterium hafniense DCB-2: Dhaf_1266
Entry
Dhaf_1266         CDS       T00822                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dhd  Desulfitobacterium hafniense DCB-2
Pathway
dhd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dhd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dhaf_1266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dhd03400]
    Dhaf_1266
Enzymes [BR:dhd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Dhaf_1266
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dhaf_1266
DNA repair and recombination proteins [BR:dhd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Dhaf_1266
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Ribosomal_S13
Other DBs
NCBI-ProteinID: ACL19323
UniProt: B8G1A8
Position
1363877..1364695
AA seq 272 aa
MPEIPEMETYKNYLQLSVLDKRIVGTEITRARSTNVPTDEFVRWVQDTSIEQVLRYGKYL
ILALSSGKALCAHMMLDGRMYYEVAGEPVELPGRSHIRLKFADHSILHFCDLRLGYLKLL
APSQVDAIKEGLGLDPLDAEFSLAAFLNILSGKRGMIKPLLMDQKNISGIGNAYSNEILF
AAGILPERKTPTLTDGERDRLYGVIPDLLQQAIAKGGYIEEPFASWDKLSGGMIPYFKVY
DRTGQPCLQCGEPIKQKTVGGRNAYYCLTCQH
NT seq 819 nt   +upstreamnt  +downstreamnt
atgccggaaattcctgaaatggaaacgtacaagaattatttacagctatccgtccttgat
aagagaattgtgggaaccgaaatcaccagggcgcgcagcaccaatgttcctaccgatgag
tttgtgagatgggtgcaggatacaagtattgagcaggtgttaagatatgggaaatacctc
atccttgccctgagctcagggaaagccctctgcgctcatatgatgcttgatggcagaatg
tattatgaagtggcgggagaacctgtagaattgccgggcagatcccatatccggctgaag
tttgccgatcactccattctccatttttgcgacttaagattaggttaccttaagctgctc
gcgccatcccaggtggacgctatcaaggaagggctgggtcttgatcctttggatgcggag
ttttccttggccgcttttttgaatatccttagcgggaaaagaggcatgattaagcctctg
ctcatggatcaaaaaaacatatcaggcataggcaacgcctattccaacgagattttattt
gccgcgggaatactgccggaacgcaaaacccccaccttaaccgatggggagagggatcgg
ctgtatggggtcatccctgatttgcttcagcaagcgattgccaaagggggatatatcgaa
gagccctttgcctcctgggataagttaagcggaggaatgattccgtattttaaggtttat
gatcgcacgggacagccttgccttcaatgtggtgagcccataaagcaaaagacagttggc
ggcaggaatgcttattattgtttaacctgccagcactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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