KEGG T00822: Dhaf

Desulfitobacterium hafniense DCB-2: Dhaf_3089

Entry

Dhaf_3089 CDS T00822

Definition

succinate--CoA ligase (EC:6.2.1.5)

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

dhd Desulfitobacterium hafniense DCB-2

Pathway

dhd00020	Citrate cycle (TCA cycle)
dhd00640	Propanoate metabolism
dhd00660	C5-Branched dibasic acid metabolism
dhd00720	Carbon fixation pathways in prokaryotes
dhd01100	Metabolic pathways
dhd01110	Biosynthesis of secondary metabolites
dhd01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:dhd00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:dhd00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:dhd00660]
Metabolism; Energy metabolism; Carbon fixation pathways in prokaryotes [PATH:dhd00720]

SSDB

Motif

Pfam:

ATP-grasp_2 ATP-grasp_5 ATP-grasp_4 CPSase_L_D2 GARS_A ATP-grasp

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3306354..3307631)

AA seq 425 aa
MARFLEYQGKEWLAKAGMPVPKGRPASTPEEAREAAEWIGGPVAVKGQVQAGGRGKAGIV
KLVNTPDEAAAAAAEILSKTVKGLPVRKVLVEEKLDIKKEFYCSFVVNGAKEARSPMLMF
SVEGGMDIESVPEDKLLKINVDPINGLQTYDAVDLAAKAGIAPEELTKFAKFLTKLSQTY
KKYDCMTLEINPFVMTGNGNLICADCKMEIDNSSVGRHPEFGFDIARDLPGEPTELDYIG
WSIEETDARGTGFLMNMGYDEVSPGYVGYHPIGGGSAMMGLDALNQVGLKPANYADTSGN
PVASKIYRVAKSVLSQPNIDGYLLGGFMMANQEQWHHAHAIVKVLREILPTQKPGLPCVL
LLCGNREDESLEILKTGLADLMTSDGPGKRIEIYGKEYVTDTKFIGERLLALSKDYRAEK
EAQGK

NT seq 1278 nt +upstreamnt +downstreamnt
atggcaagatttctagagtatcaaggtaaagaatggcttgcaaaagcaggaatgccggta
cctaagggtcgtccggcatcgacccccgaagaagcaagggaagccgctgaatggattggc
ggtcctgttgcggtaaaaggtcaggtacaagcgggtggtcgtggtaaagctgggattgtt
aaactggttaacactcccgatgaggcagcagcagctgctgctgaaattctctccaaaaca
gtaaaaggcttaccggtgcgcaaagttcttgtggaagaaaaattggatatcaaaaaagag
ttctattgctcctttgtcgttaacggagcaaaggaagcccgttcaccaatgcttatgttc
agcgttgagggcggtatggatattgaaagtgtcccggaagacaaattactgaagatcaat
gtggaccccatcaatggactgcagacttatgatgcggtagatttggctgctaaagcagga
atagctccggaagaattaacgaagtttgctaaatttttgacgaaactttctcaaacttat
aagaaatacgactgtatgacccttgagatcaaccccttcgttatgacagggaatggcaat
ctcatctgtgccgactgcaagatggaaatcgacaacagttccgtaggccgtcatcccgag
ttcggctttgacatcgcccgcgacctgcctggtgagcccacagagttggactacatcggc
tggagcattgaggaaaccgatgcccgtggcacaggcttccttatgaatatgggatacgat
gaagtcagccccggatatgttggctatcatcccatcggcggcggttcggcgatgatgggc
ttggatgctcttaatcaagtaggtctgaagccggccaactatgccgacaccagcggcaac
cccgtagcttccaaaatttatcgcgttgccaaatcggtgctttcccagcccaatattgac
ggctacctacttgggggctttatgatggccaaccaggaacaatggcatcatgctcatgct
atagtcaaagtgcttcgtgaaatcctccccactcaaaaaccaggattgccttgtgtgctc
ctgctttgcggcaaccgggaagatgaatctttggaaattctcaaaaccggactggctgat
ctgatgaccagcgatggacctggaaagagaattgagatttacggcaaagaatatgtaacc
gatacgaagttcattggtgaaagacttttagctctgagcaaagactatcgggctgagaaa
gaagctcaaggaaagtag

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DHD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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