KEGG T04584: BO996

Delftia sp. HK171: BO996_23130

Entry

BO996_23130       CDS       T04584

Name

(GenBank) pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

dhk Delftia sp. HK171

Brite

KEGG Orthology (KO) [BR:dhk00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dhk03009]
    BO996_23130
Enzymes [BR:dhk01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BO996_23130
Ribosome biogenesis [BR:dhk03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BO996_23130

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

APE50506

Position

complement(5254271..5255341)

AA seq 356 aa
MSRSTRQTGQAPAPQGLVSSAPGESPWEPGEDEAEGGEVEAAAAELREITVPPAQHGLRA
DKVLAECVAEFSRSYLQQLLAQGAVTLNGRVLVKPATKVAAGDRMVLEMRPTQQSMAFQP
EDMALDVVYEDEHLLVVNKPAGLVVHPAPGNWTGTLLNGLLGRDPKAREVPRAGIVHRLD
KDTSGLMVVARSRAAMDALVAMIAARDVSRQYLALAHKAWGPRKRREVDAPIGRDPRNRL
RMAVVDLAQHAGKTARTDIDLLAGNEEVSLVRCTLHTGRTHQIRVHMASLGHPLVADAVY
GGKEAGGMARQALHAFRLAFTHPMTGQALVLRAPLPPDMAQALENWGLSYNPAESL

NT seq 1071 nt +upstreamnt +downstreamnt
atgagccgcagcaccaggcaaaccggacaagcccctgccccgcaggggcttgtttcttct
gcgcccggcgaatcgccgtgggagccgggcgaggacgaggccgaaggcggcgaggtcgag
gctgccgcagccgagctgcgcgagatcaccgtgccgccggcccagcacggcctgcgcgcc
gacaaggtgctggccgaatgcgtggccgagttctcccgcagctatctgcagcaactgctg
gcgcagggcgcggtcacgctcaatgggcgtgtgctggtcaagccggccaccaaggtggcc
gccggcgaccggatggtgctggagatgcggcccacgcagcagagcatggccttccagccc
gaagacatggcgctggacgtggtgtatgaggacgagcacctgctggtcgtcaacaagccg
gctggcctggtcgtgcacccggctccgggcaattggacgggaaccctgctcaacggcctg
ctggggcgcgaccccaaggcgcgggaggtgccgcgcgccggcatcgtccaccgcctggac
aaggacaccagcggactcatggtggtggcgcgcagccgcgccgccatggacgcgctggtg
gccatgatcgccgcgcgcgatgtcagccgccagtacctggcgctggcccacaaggcctgg
ggcccgcgcaagcgccgcgaggtcgatgcgcccatcggccgcgacccgcgcaaccgcctg
cgcatggccgtggtcgacctggcgcaacatgcaggcaagaccgcgcgcaccgacatcgac
ctgctggccggcaacgaggaagtcagcttggtgcgctgcacgctgcacacgggccgcacc
caccagatccgcgtgcacatggcatcgctgggccacccgctggtggccgatgccgtctac
ggcggcaaggaggctggcggcatggcgcgccaggcgctgcacgccttccggctggccttc
acccatcccatgacaggccaggccctggtgctgcgcgcgccgctgccgcccgatatggca
caggcgctggaaaattgggggctgagctacaatcccgccgaaagcctctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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