KEGG   Acidovorax ebreus: Dtpsy_1898
Entry
Dtpsy_1898        CDS       T00853                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
dia  Acidovorax ebreus
Pathway
dia03030  DNA replication
dia03430  Mismatch repair
dia03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dtpsy_1898
   03430 Mismatch repair
    Dtpsy_1898
   03440 Homologous recombination
    Dtpsy_1898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dia03032]
    Dtpsy_1898
   03400 DNA repair and recombination proteins [BR:dia03400]
    Dtpsy_1898
Enzymes [BR:dia01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Dtpsy_1898
DNA replication proteins [BR:dia03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Dtpsy_1898
DNA repair and recombination proteins [BR:dia03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Dtpsy_1898
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ACM33355
UniProt: A0A9J9UAV6
Position
complement(2024183..2027722)
AA seq 1179 aa
MFVHLRLHTEFSVVDGTTRIDEVVKAAAKDGQPALAITDLNNLFGAIKFYKEGRGKGVKP
ILGAEIYLEGEAAGAPSRMVLLVQNRTGYLNLSELLARAWTRNIVRNQALCTWEWLQELG
DGLIALAGAQAGPVGQALMKGDDAGAAQLALRLAGIFPHRFYLEVQRAGRPDDEAHVTAA
VQLAARLALPVVATHPVQFATPDDYEAHEARVCIAEGEILANPRRVRRFTREQYFKSSAE
MEALFADVPSALANTVEVAKRCNVSLVLGKPQLPNFPIPGGMTMEQYFRHASHEGLEERL
LHLYPDTAERDRQRPRYQERLEFELGTILKMGFPGYFLIVGDFIQWAKKNGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQANRDRVIDYVKDKYGK
EAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYPPEPKKEGD
KNNYALELEPILYERVRKEEDVRTIIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMQRHKGQENFAFENIPL
DDAATYKLFSDGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEVVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKAE
EMAEHRAIFRKGAAEKGISQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFYCANMTVEMDDTDKLKVLYEDAVKHFGMTFEPPDINRGNYRFEPVTDKVIRYGLGA
VKGTGQQAIEAIIAAREGQGVGPQGATRGPFKSLFDFCVRVDRTRVNKRTVEALIKAGAF
DALQLNRAALVASLDRAFEFANAQIANANQGGLFDMMGDDAIGSSTQEPDLVDVMPWGIK
ERLMQEKTAVGFYLSGHLFDEVHQEVRRFVRTAIDELVDSRETQVVAGIVSDYRVINGQR
GRLALFKLDDKSGVIEASADEGLINANAGLLKDDEFVVVSGRLQLDHFSGGLRMKVQQVW
DLAGARARYGRYLQVCLGQQLPDIGALVRDYPPQREETEHGEVLTHGLRVRMQLRCTAAA
GAATAEVQLGEASRFFPSDAALAAWSAQAGSGAVNVVYE
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgtttgtccacttgcgcttgcacactgaattttccgtcgtggacggaaccacccgtatc
gacgaggtcgtcaaggcggcggcgaaagacggccagcccgccctggcgatcacggatctg
aacaacctgttcggcgcgatcaagttttacaaggaaggccggggcaagggcgtcaagccc
atcctgggcgccgaaatctacctggagggcgaagcggcaggcgcaccctcgcgcatggtg
ctgctggtgcagaaccgcaccgggtatctgaacctctccgaactgctggcccgcgcgtgg
acgcgcaacatcgtcaggaaccaggcgctgtgcacctgggagtggctgcaggaattgggc
gacggcctgatagccctcgctggagcgcaggccggtcccgtggggcaggcgctcatgaag
ggcgatgacgccggagctgcgcagctggcgctgcgtctggcgggcatcttcccgcaccgc
ttctacctggaggtccagcgcgccggacgccctgacgacgaagcccatgtcaccgcggcg
gtacagcttgccgcgcgcctggccctgccggtggtagccacccacccggtgcagttcgca
acgccggacgattacgaggcgcacgaggcgcgcgtgtgcattgccgagggcgagatcttg
gcgaatccgcggcgcgtgcgccgtttcacgcgcgagcagtatttcaagagcagtgccgag
atggaagcgctgttcgccgacgtacccagcgccctcgccaacaccgtggaggtggccaag
cgctgcaatgtgtcgctggtgctgggcaagccgcaactgccgaacttccccattccgggt
gggatgacgatggagcagtacttccgccacgcgtcccacgagggcctggaggagcggctg
ctgcacctgtacccggacaccgccgagcgcgaccgccagcgcccccgctaccaggagcgg
ctggagtttgaactgggcacgatcctgaagatgggctttcccggctacttcctcatcgtg
ggtgacttcatccagtgggccaagaagaacggctgcccggtgggccccgggcgcggctcg
ggtgcgggctcgctcgtggcctatgcgctcaagatcacggatctggatccgctgcaatac
aacctgctgttcgagcgcttcctgaaccccgagcgggtgtccatgcccgacttcgacatc
gatttttgccaggccaaccgcgaccgcgtgatcgactatgtgaaggacaagtacggcaag
gaggccgtgagccagatcgccacgttcggcacgatggcggccaaggctgccatccgcgac
gtggggcgggtgatggatatgagctacacgttctgtgacggtatctcgaagctggtgccc
ggcaaacccggccagacctatacgctggcctacccgccagagcccaagaaggaaggggac
aagaacaactacgccctggagttggaacccatcctgtacgagcgcgtgcgcaaggaggag
gacgtgcgcaccatcatcgagatggcgcaaaagctcgaagggatgacgcgcaatattggc
atgcacgccggcggcgtgctgatcgcgccgggcaaactgaccgatttctgcccgctgtac
cagcagccaggcagcgaatcggcggtgagccagtacgacaaggacgacgtggaggccatc
ggcctggtgaaattcgacttcctgggcttggcgacgctgaccatcctggaaatcgcgcgt
gagttcatcatgcagcgtcacaaagggcaggaaaacttcgcgttcgagaacattcccctg
gacgatgctgcgacctacaaactgttctcggacggcaagacagaagccgtgttccagttt
gaaagccggggcatgcaaggcatgctcaaggaagcgcgcccaagcaggctggaagaccta
atcgccttgaatgccctgtaccggcccggccccatggacctgattcccagcttcgtgaac
cgcaagcacggcaaggaggtggtggagtacccgcatccgctggtggagcccgtgctggcc
gagacctacggcatcatggtctaccaggagcaggtgatgcagacggcgcaggtgctgggt
ggttactcgctcggcggcgccgacatgctgcgccgcgccatgggcaagaaaaaggccgag
gaaatggccgagcaccgtgccatcttccgcaagggtgcagccgaaaagggtatcagtcag
gacaaggccgacgaggtcttcgacctgatggaaaagtttgcgggttacggcttcaacaag
tcgcacgccgccgcctattcgctgctggcctaccacaccgggtggctcaaggtgcactac
acggcggagttttactgcgccaatatgaccgtggaaatggacgacaccgacaagctcaag
gtgctctatgaagatgcggtcaaacatttcggcatgaccttcgagccgccggacatcaac
cgcggcaattaccgcttcgagccggtgacggacaaggtcatccgctatggcctgggcgca
gtcaagggcacgggacagcaggcgatcgaggccatcatcgctgcacgcgaagggcagggc
gtgggcccacagggcgcaacccgggggcctttcaagagcttgtttgacttttgcgtacgc
gtggaccgcacgcgcgtcaacaagcgcacggtggaggcgctcatcaaggcgggcgccttc
gatgccctgcagctcaaccgtgccgcgctcgtggcatccctcgatcgggcgttcgagttt
gccaatgcgcagatcgccaacgccaaccaaggcgggctgttcgacatgatgggcgatgac
gccatcggctccagcacgcaggagcctgatctggtggatgtgatgccctggggcatcaag
gaacggctgatgcaggagaagaccgcggtgggcttctacctctcgggccacctgttcgat
gaagtgcaccaggaagtgcgccgcttcgtgcgcactgctatcgacgaattggtggacagc
cgcgagacgcaggtggtcgccggcatcgtgagtgactaccgcgtcatcaacgggcagcgc
ggcaggctggcgttgttcaagctggacgacaagtcgggcgtcatcgaggcttccgccgac
gaagggctgatcaatgcgaacgccggcctgctcaaggacgatgaattcgtagtggtgagt
ggtcggctgcagttggaccacttcagcggaggcctgcgcatgaaggtgcagcaggtctgg
gatttggcgggtgcgcgggcacgctatgggcgctatctgcaggtgtgcctggggcagcag
ttgccagacatcggggcgctggtgcgtgactatcctccgcaacgggaggaaaccgagcac
ggcgaggtgcttacccatggcctgcgcgtgcgcatgcagttgcgctgcacagcggcggct
ggcgcggccacggccgaggtgcagttgggagaggccagccggttctttcccagcgatgct
gcgctggccgcgtggagcgctcaggcgggcagcggtgctgtgaatgtggtctatgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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