KEGG   Desulfurispirillum indicum: Selin_2171
Entry
Selin_2171        CDS       T01383                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
din  Desulfurispirillum indicum
Pathway
din03030  DNA replication
din03430  Mismatch repair
din03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:din00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Selin_2171
   03430 Mismatch repair
    Selin_2171
   03440 Homologous recombination
    Selin_2171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:din03032]
    Selin_2171
   03400 DNA repair and recombination proteins [BR:din03400]
    Selin_2171
Enzymes [BR:din01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Selin_2171
DNA replication proteins [BR:din03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Selin_2171
DNA repair and recombination proteins [BR:din03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Selin_2171
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DEDDh_C
Other DBs
NCBI-ProteinID: ADU66891
UniProt: E6W3D7
Position
2400162..2400662
AA seq 166 aa
MQNFTAIDFETANEQRTSACAIGVVVVENRQIVRQYARLIRPEPMRFASFNTAVHGLTAA
DVAGAPVFGELWPEIAADIVSAPLLVAHNTSFDMSVLQHCLRSSGIAANIPDAVCSCRMA
KKLLPQLVNHKLNTLCKHFGIPLNHHDALSDAQAAARIILELYQER
NT seq 501 nt   +upstreamnt  +downstreamnt
atgcagaacttcaccgccatcgactttgagaccgccaatgaacaacgcacgagcgcctgt
gccatcggggttgtggtagtggagaatcggcagatcgtgcgacagtatgcgcgcctgatt
cgcccggaacccatgcgctttgcgtccttcaacacggctgttcacggcctgactgctgcg
gatgtggctggtgcaccggtatttggtgagctgtggccagagattgccgcggatattgtt
tctgctccattgttggtggcccacaacacttcctttgacatgagcgtcctgcagcactgc
ctgcgttccagtggcattgccgccaatatccccgacgctgtctgctcatgccgtatggcg
aaaaagctactcccccagctggtcaaccacaaactcaacacgctttgtaagcacttcggc
ataccattaaaccaccacgacgccctcagcgatgcccaagcggcggcgcgcattattctg
gagttataccaggagaggtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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