KEGG   Dokdonella koreensis: I596_3436
Entry
I596_3436         CDS       T04377                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dko  Dokdonella koreensis
Pathway
dko03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    I596_3436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dko03400]
    I596_3436
Enzymes [BR:dko01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     I596_3436
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     I596_3436
DNA repair and recombination proteins [BR:dko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     I596_3436
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Auto_anti-p27 zf-dskA_traR
Other DBs
NCBI-ProteinID: ANB19425
UniProt: A0A160DXH8
Position
3939981..3940796
AA seq 271 aa
MPELPEVETARRGLAPHLVGQRVDALDIRQPKLRWPIPPALREGLVGHRIEAVQRRAKYL
LVDTDAGSALLHLGMSGMLRVLPASTPIGPHDHVDWQLESGRVLRYTDPRRFGCQLWQPR
GETHPLLAHLGPEPLSDAFDGDLLWHRSRGRAAPVKLFVMDQAIVVGVGNIYASEALFAA
GIDPRQAAGRIARARYVRLADAVRRILAHAITRGGTTLRDFLNPDGAPGYFEQELFVYGR
EGQACRTCGTPIRGVRLGQRSTFYCPACQTR
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcccgaattgcccgaagtggagaccgcgcggcgcggcctggcgccgcacctggtcggc
cagcgcgtcgacgccctggacatccgccagccgaagctgcgctggccgatcccccctgcc
ctgcgcgaagggctggtcggccaccggatcgaggcggtacagcggcgggcgaagtacctg
ctggtggataccgacgccggcagcgcgctgctgcacctcggcatgtcgggcatgttgcgc
gtcctgcccgcctccacgccgatcggcccacacgaccatgtcgactggcagctcgagtcc
ggccgcgtactgcgctacaccgacccgcgccggttcggctgccagctctggcagccgcgc
ggcgagacgcacccgctgctggcccacctcggtcccgagccgctgtccgacgcgttcgac
ggcgacctgctctggcaccggtcgcgcggccgcgcggcgccggtcaagctgttcgtgatg
gaccaggcgatcgtggtcggcgtcggcaacatctatgcgtccgaagcgctgttcgccgcg
ggcatcgacccgcggcaggcggccggcaggatcgcgcgtgcgcgctacgtccggctggcc
gacgcggtgcggcgaatccttgcgcatgcgatcacgcgcggcggcaccaccctgcgcgat
ttcctgaatcccgacggcgctcccggttacttcgagcaggaactgttcgtctatggccgc
gaaggccaggcctgccgcacctgcggcacgccgattcgcggcgtacggctgggccagcgc
agcacgttctactgtcccgcctgccagacgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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