KEGG   Dokdonella koreensis: I596_3447
Entry
I596_3447         CDS       T04377                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
dko  Dokdonella koreensis
Pathway
dko03420  Nucleotide excision repair
dko03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    I596_3447
   03430 Mismatch repair
    I596_3447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dko03400]
    I596_3447
Enzymes [BR:dko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I596_3447
DNA repair and recombination proteins [BR:dko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     I596_3447
   MMR (mismatch excision repair)
    Other MMR factors
     I596_3447
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ANB19435
UniProt: A0A160DXI4
Position
3951966..3954140
AA seq 724 aa
MSTPAGHCLVLAGAGSGKTRVLTHRIGWLLEVERVSPWSILAVTFTNKAAGEMRTRTEGL
VGNDARGLTIGTFHGIAHRLLRRHWREAGLPETFQILDADDQQRLVKRTIQGLGLDEARF
PPRQAAWFINGAKDEGRRPDAIAADGNPLAQTLVDIYRAYENACRRAGLVDFAELLLRAH
ELWLNDDALLAHYRERWRHLLIDEFQDTNTLQYAWIRVLAGTTAQVFVVGDDDQAIYGWR
GARVENVQHFLRDFPDAATIRLEQNYRSTSNILGAANAVIANNRDRLGKQLWTAGPAGAP
IEVYAAYNEQDEARYVVDRIGEHIDGGGSAADVAVLYRSNAQSRNFEEHLIQRDIPYRVY
GGLRYFERAEIKDALAYLRLLANRHDDAAFERVVNTPPRGIGDRTVDALRRRARRDDASL
WEASLAELAGAELAGRAKNALRAFLELIDALARECLSPEAAGDVPADAVIDEPLSLQKQV
ELAIGRTGLRDFYESDSRGGAESRVENLDELVNVADRFEPTPEDVEAGLSRLGAFLAHAA
LEAGEGQGEAWQSCVQLMTLHSAKGLEFPLVFLVGLEDGLFPSQKSMEEPGRLAEERRLA
YVGITRARERLVLTYAESRRLHGMEMYGRPSRFLAEIPRELLHEVRPRVQVSRPVFAGPR
ALAAEPDAQGLSLGQRVRHETFGEGVVVDFEGSGNHMRVQVNFEDSGQKWLVLAYARLSP
LNGA
NT seq 2175 nt   +upstreamnt  +downstreamnt
gtgagcacgccggcgggccactgcctcgtgctggcgggtgccggctccggcaagacccgg
gtactcacgcaccgcatcggctggctgctcgaggtcgaacgcgtctcgccctggtcgatc
ctcgcggtgaccttcaccaacaaggccgccggcgagatgcgcacgcggaccgaggggctg
gtcggcaacgacgcccgcgggctgacgatcggcacgttccacggcatcgcccaccggctg
ctgcgccgccactggcgcgaggcgggcctgcccgagacgttccagatcctggacgccgac
gaccagcagcggctggtcaagcgcacgatccagggactcgggctggacgaggcacgcttt
ccgccacgccaggccgcctggttcatcaacggcgccaaggacgaaggccggcgtcccgac
gcgatcgccgccgacggcaatccgctggcccagaccctggtcgacatctaccgcgcctac
gagaacgcctgccgccgcgccggtctcgtcgacttcgccgagctgctgctgcgcgcccac
gagctgtggctcaacgacgacgccctgctcgcgcactaccgggagcgctggcggcacctg
ttgatcgacgagttccaggacaccaacacgctgcagtacgcctggatccgcgtgctggcc
ggaacgaccgcccaggtgttcgtggtcggcgacgacgaccaggcgatctacggttggcgc
ggtgcgcgcgtggagaacgtgcagcatttcctgcgcgacttccccgatgcggccacgatc
cggctcgaacagaactaccgctcgacctccaacatcctcggcgccgccaatgccgtgatc
gcgaacaaccgcgaccgcctcggcaagcagctgtggacggcgggcccggccggcgcgccg
atcgaggtctacgcggcgtacaacgaacaggacgaggcccgctatgtggtcgaccgcatc
ggcgagcacatcgacggcggtggatcggcggcggacgtggccgtgctctatcgatccaac
gcgcaatcgcgcaacttcgaagagcacctgatccagcgcgacattccgtatcgcgtctac
ggcggcctgcgctacttcgaacgcgccgagatcaaggacgcgctggcgtacctgcgcctg
ctcgccaatcgccacgacgatgcggcgttcgagcgcgtcgtcaacacgccgccccgcggc
atcggcgaccgcacggtcgatgcactgcggcggcgtgcgcgccgggacgacgcctcgctg
tgggaggcctctctggcggagcttgccggcgcggagctggccggccgcgcgaagaacgcg
ctgcgcgcattcctggagctgatcgatgcgctggcgcgcgaatgcctgagtccggaggcg
gcaggtgacgtcccggccgatgccgtgatcgacgagccgctgtcgctgcaaaagcaggtc
gagctcgcgatcgggcgcaccggcctgcgcgacttctacgaatcggactcgcgcggcggt
gccgaatcgcgcgtcgaaaacctcgacgaactcgtcaacgtcgccgaccggttcgagccg
acgcccgaggacgtagaggcgggattgtcgcgcctcggcgccttcctggcccatgccgcg
ctcgaagcgggcgaaggccagggggaagcctggcaatcgtgcgtccagctgatgacgctg
cactcggccaagggcctggagtttccgctggtcttcctggtggggctcgaggacgggctg
tttccgagccagaagtcgatggaggaacccggccgcctggccgaggagcggcggctggcc
tatgtcggcatcacgcgggcacgcgagcgcctggtgctgacctacgccgaatcacgccgc
ctgcacggcatggagatgtacggccggccgtcgcgtttcctggccgagatcccgcgcgag
ctgctgcacgaggtgcgtccccgggtgcaggtcagccggccggtgttcgccggaccgcgt
gccctggcggccgaaccggacgcccagggcctttccctgggccagcgcgtccgccacgag
accttcggggaaggcgtcgtcgtcgacttcgaaggcagcggcaaccacatgcgtgtgcag
gtcaatttcgaggacagcggacagaagtggctggtgctcgcctacgcccggctttcgcct
ctgaacggcgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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