KEGG   Desulfofundulus kuznetsovii: Desku_0667
Entry
Desku_0667        CDS       T01499                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
dku  Desulfofundulus kuznetsovii
Pathway
dku03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dku00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Desku_0667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dku03400]
    Desku_0667
Enzymes [BR:dku01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desku_0667
DNA repair and recombination proteins [BR:dku03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Desku_0667
    RecFOR pathway proteins
     Desku_0667
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_22 nSTAND3 AAA_18 DUF815 TsaE AAA_3 AAA_17 NB-ARC AAA_33 IstB_IS21 AAA_14 RNA_helicase NTPase_1 NACHT bpMoxR Sigma54_activ_2 AAA_28 Rad17 AAA_PrkA AAA_24
Other DBs
NCBI-ProteinID: AEG14276
Position
711356..712378
AA seq 340 aa
MEERLLSAAFRSEDGEGEYTLRPRRLQDFIGQEKIKESLSIFISAAKERGEVLDHVLLFG
PPGLGKTTLAGIIASELGVGIRVTSGPAVERPGDLAAILTNLSLGDVLFIDEVHRLSRPV
EEILYPAMEDFALDIVIGKGPGARSLRLELPRFTLIGATTRAGLLTSPLRDRFGVICRLE
YYEVNDLVQIISRSAHILGIPIEAEGALEIARRSRGTPRVANRLLKRVRDYAQVRAGGII
TRAVAVKALQFLEVDPLGLDHTDRRLLHIIIEKFNGGPVGLDTLAAAAGEEAGTLEDVFE
PYLLQIGLLARTPRGRVATPAAYKHLGLPLKRDPVQASLW
NT seq 1023 nt   +upstreamnt  +downstreamnt
ttggaagaaaggctgctttccgccgcctttcggtcggaggacggggaaggcgaatacacc
ctgcggccacggcggttgcaggattttatcggccaggaaaaaattaaggaaagcctgtcc
atttttataagcgcggccaaggagcggggggaagtgctggatcacgtgcttttgtttggt
ccccctggcctgggtaagaccaccctggccggcatcatcgccagcgagctgggggtaggc
atccgggtcacatcgggtccggccgtggaacgccccggtgacctggcagccattctgacc
aacctctccctgggagatgtgttgtttattgacgaagtccaccgcctgagccggccggtg
gaggaaatactgtacccggccatggaggactttgccctggatattgtcattggtaaagga
ccgggggcccgttccctgcgcctggagctaccccggtttaccttgattggcgccaccacc
cgggccggcctgcttacatctcccctgcgggaccgctttggagtaatttgccggctggaa
tattacgaggtcaacgatctggtgcagattatctcccgttcggcccatattctcgggatt
cccatagaagcggagggggctttagaaattgcccggcgctcccggggaacaccccgggtg
gccaatcgtctattaaaacgggtgcgggattacgcccaggtccgggccggaggcataatc
acccgggcagtagctgtgaaggcgctgcagtttctggaggtggaccccctgggcctggat
cataccgaccggcgccttctgcacataattatagagaagtttaacggcgggcctgtaggc
ctggataccctggcggcagctgccggggaagaagcgggtaccctggaggatgtttttgaa
ccctaccttttgcagatagggctcctggcccgtacaccccgggggcgggtggccacccct
gcggcctacaaacaccttggcttacctttaaaacgagatcctgttcaagccagcctgtgg
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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