KEGG   Dehalogenimonas lykanthroporepellens: Dehly_1439
Entry
Dehly_1439        CDS       T01264                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
dly  Dehalogenimonas lykanthroporepellens
Pathway
dly03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dehly_1439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dly03021]
    Dehly_1439
   03019 Messenger RNA biogenesis [BR:dly03019]
    Dehly_1439
Transcription machinery [BR:dly03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Dehly_1439
Messenger RNA biogenesis [BR:dly03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Dehly_1439
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA AAA_22 ATPase_2 OB_RNB NACHT Mor
Other DBs
NCBI-ProteinID: ADJ26726
Position
1410139..1411479
AA seq 446 aa
MTEQDLNLNNNPDAEAPLPPEPPPPPLSLSRLETMSREDLLELAKRMKVSGITGAKKQDI
ILRLLQATTEQQGNIFCSGILEIMPDGYGFLRQGTLLPSSSDIYVSQSQIRRFGLRTGDM
IIGQSRQAKPGEKYYSLLRVEAINDLNPEGAKRRPFFGALTPTFPDRLLNLETEPSMLST
RLINLVAPIGRGQRGMVVSPPKAGKTMLMKNIANSVGTNYNDIHLMVVLIGERPEEVTDM
RRSVKGEVMAATFDEAVENQTRVAELALERAKRMVESGKDVVILLDGITRLTRAYNLAMP
SSGRTLSGGLDPVALHPAKKFFGAARNTAEGGSLTIIATCLVDTGSRMDDLIYEEFKGTG
NMELHLDRRLAERRVFPAIDIPRSGTRREELLHPEASYRQIQLLRRMVGIIADDSNNFAE
VTERVLEKLKKSKNNVEFLTNLTKEK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgactgaacaagaccttaatctgaacaacaaccctgacgccgaagcccccctccccccg
gagccgccgccgccgccgttgtccttgtcgcggctggaaacgatgtcccgtgaggacctt
ttggagctggccaagcgcatgaaggtgtccggcatcaccggcgccaagaagcaggacatc
atcctgcgtctgctccaggccactaccgaacagcagggcaacatcttctgctccggcatc
ctggaaatcatgcccgacggctacggcttcctgcgccagggtacgctgttgccctcgtcg
tcggacatatatgtttcccagtcccagatacgccgcttcggtctgcgcaccggcgacatg
attatcggccagtcccgccaggccaagccgggcgaaaaatactattccctgctccgggtg
gaggccatcaacgacctcaaccccgaaggcgccaagcgccgccccttcttcggcgccctc
acccccaccttcccggaccgtctgctcaatctggaaaccgaacccagcatgctctccacc
cggctcatcaacctggtggcccccatcggccgcggccagcgcggtatggtggtgtcgccg
cccaaggccggcaagaccatgctgatgaaaaacatcgccaactccgtcggaaccaattac
aacgatatccacctgatggtggtgctcatcggcgagcgtccggaagaagtcaccgacatg
cgccgctccgtcaagggcgaggtcatggccgccaccttcgacgaagccgtggagaaccag
acccgcgtcgccgaactggcgctggaacgcgccaagcgcatggtggagtccggcaaggat
gtcgtcatcctgctggacggcatcacccgccttacccgcgcctacaacctggccatgccg
tcgtcgggccgaaccctttccggcggtctggaccctgtcgccctccacccggccaagaag
ttcttcggcgccgcccgcaacaccgccgaaggcggctcgctgaccatcatcgccacctgc
ctggtggacaccggttcccgcatggacgacctcatctacgaagagttcaagggtaccggc
aacatggaactgcatctggaccgccgcctggccgaacgccgcgtcttcccggccatcgac
attccccgctccggcacccggcgtgaggaactgctccatccggaggcctcctaccgccag
attcagcttctgcgccgcatggtgggcatcatcgccgatgactccaacaacttcgccgaa
gtcaccgagcgcgtgctggagaagctcaagaagagcaagaataacgtggagttcctgacc
aatctgacgaaggagaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (57)   

Download RDF
DBGET integrated database retrieval system