KEGG T00030: Dmel

Drosophila melanogaster (fruit fly): Dmel_CG10418

Entry

Dmel_CG10418 CDS T00030

Definition

CG10418 gene product from transcript CG10418-RA

Orthology

K12621

U6 snRNA-associated Sm-like protein LSm2

Organism

dme Drosophila melanogaster (fruit fly)

Pathway

dme03018	RNA degradation
dme03040	Spliceosome

Module

dme_M00396	Lsm 2-8 complex
dme_M00397	Lsm 1-7 complex

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:dme03040]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:dme03018]

SSDB

Motif

Pfam:

LSM SM-ATX DUF2642

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

Position

3L:69B2-69B2

AA seq 95 aa
MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR

NT seq 288 nt +upstreamnt +downstreamnt
atgctcttttactccttcttcaagtcgctggtgggcaaggaagtcgttgtggagttgaaa
aacgacctcagcatatgtggcaccctgcactcggtggatcagtacctgaacatcaagctg
acggatatcagtgtcacagatccggacaagtacccccacatgctgagcgtcaagaactgc
ttcatccgtggctccgtggtgcgatacgtgcagctgccgggcgacgaggtggacacccag
ctgctccaggatgcggcgcgaaaggaggctgttgtgagcacaagataa

All links

Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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