KEGG   Drosophila melanogaster (fruit fly): Dmel_CG1249
Entry
Dmel_CG1249       CDS       T00030                                 
Symbol
SmD2
Name
(RefSeq) small ribonucleoprotein particle protein SmD2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmel_CG1249 (SmD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dme03041]
    Dmel_CG1249 (SmD2)
   03032 DNA replication proteins [BR:dme03032]
    Dmel_CG1249 (SmD2)
Spliceosome [BR:dme03041]
 Complex A
  U1 snRNP components
   Sm proteins
    Dmel_CG1249 (SmD2)
  U2 snRNP components
    Dmel_CG1249 (SmD2)
 Complex B
  U1 snRNP components
    Dmel_CG1249 (SmD2)
  U4/U6.U5 tri-snRNP components
    Dmel_CG1249 (SmD2)
 Complex C
  U2 snRNP components
    Dmel_CG1249 (SmD2)
DNA replication proteins [BR:dme03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     Dmel_CG1249 (SmD2)
SSDB
Motif
Pfam: LSM Hfq SPECT1
Other DBs
NCBI-GeneID: 40781
NCBI-ProteinID: NP_649645
FlyBase: FBgn0261789
UniProt: Q9VI10 A0A1B2AJC2
Position
3R
AA seq 119 aa
MALVKPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDR
HCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNPLATAAGK
NT seq 360 nt   +upstreamnt  +downstreamnt
atggctcttgtgaaaccgaaatcggagctgaccccggaggagctggcgcggcaggaggag
gaggagtttaacaccggcccgctgtccgtgctcacgcagtccgtgaagaacaacacccag
gtgctcatcaactgccgcaacaacaagaagctgctgggcagggtaaaggccttcgatcgg
cactgcaacatggtactggaaaacgtgaaggagatgtggacggagctgccgcggaccggt
aagggcaagaagaaggtgaagcccgtgaacaaggatcggttcatatcgaagatgttcctg
cgaggcgattctgtcatcctggtcctaaggaatcccctggccacggcggccggcaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (215)   
   KEGG ORTHOLOGY (1)   
   RefGene (210)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (228)   

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