KEGG   Drosophila melanogaster (fruit fly): Dmel_CG17023
Entry
Dmel_CG17023      CDS       T00030                                 
Symbol
Dbp80
Name
(RefSeq) dead box protein 80, isoform B
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03013  Nucleocytoplasmic transport
dme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmel_CG17023 (Dbp80)
   03015 mRNA surveillance pathway
    Dmel_CG17023 (Dbp80)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG17023 (Dbp80)
Enzymes [BR:dme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Dmel_CG17023 (Dbp80)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Dmel_CG17023 (Dbp80)
SSDB
Motif
Pfam: DEAD Helicase_C tRNA-synt_1b AAA_30
Other DBs
NCBI-GeneID: 3354919
NCBI-ProteinID: NP_001015151
FlyBase: FBgn0024804
UniProt: Q5LK13
Position
3L
AA seq 447 aa
MGDWAKKAEDQEVSKLVDKLNLDSKSGEETDFDVADPAETSLLIKILGKGLVNTKLSLDI
QQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQ
SGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVR
GEEVDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIR
IHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEG
KYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRF
RSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFGKKTKF
VFIPVTLRVNGYTIFFKMYVTGKRKLF
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgggtgattgggctaaaaaagcagaggaccaggaggtttctaagctggtcgacaaactt
aacctagactctaaatctggagaagaaaccgatttcgacgtcgctgatccagctgaaaca
agtctcctcataaaaatactaggaaaggggctggtgaacacaaagctatctctcgacatt
caacaaaaaaatccgaattcacccttacattccgtgaaaacatttgaagccttacaccta
aaagcatctctgttaaagggaatttacgcaatggggtttaatactccatcaaaaattcaa
gaaacagcgttgccaactcttctcgcagatccaccgcaaaatatgatagcacaaagccag
tctgggacaggcaaaacagccgcatttgtattggccatgcttagccgagtcaacgtttgt
ttaaatcatcctcaggttctgtgtttatcccctacgtacgagttggcaattcaaactgga
gaagtggctgcgcgaatgggacaattttgtcgggaaataaagctaagatttgcagtacgc
ggagaagaggttgatcgcagtaaaaaaattgaagaacacattttgattggcaccccagga
aaacttttggattggggaataaaatttcgtttatttgatatgaagaaaatatccgttttt
gtattggatgaagcagatgtaatgatagccacccaaggtcatcatgatcaatgcattcga
atacacaaaatgctgaatccacattgccaaatgttgtttttctctgctacttatggtaaa
gaggttatggactttgctcggctgattgttgcagatcccacaataataagattaatgcgt
gaagaggaatcacttgaaaacataaagcaatattatgttaagtgtaaaaatgaagaagga
aaatataatgcgattcaaaatatttacggttgcataagcgttggtcaagctataatattt
tgccatacaaaaagaactgctgcttggcttgcagcaaaaatgacgtcggatggtcattct
gttgctgttcttaccggggatttaacagttgtgcaaagacttgatgttttagatcgtttc
cgttcaggacttgagaaggtgcttatcactacaaatattttatcaagaggcattgatatt
gaacaagttacaattgtagtcaatttcgatttgcccgtagaccttgatgggatggctgac
tgtgaaacttatttacatcgaataggacggactgggaggtttggtaagaaaacaaagttc
gtttttatacccgttactcttagagtaaacggatatactatattttttaaaatgtatgta
accggcaaaaggaagcttttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (42)   

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