KEGG   Drosophila melanogaster (fruit fly): Dmel_CG5753
Entry
Dmel_CG5753       CDS       T00030                                 
Symbol
stau
Name
(RefSeq) staufen, isoform A
  KO
K17597  double-stranded RNA-binding protein Staufen
Organism
dme  Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:dme00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dme01009]
    Dmel_CG5753 (stau)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG5753 (stau)
Protein phosphatases and associated proteins [BR:dme01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     Dmel_CG5753 (stau)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     Dmel_CG5753 (stau)
   mRNA cycle factors
    Stress granule specific factors
     Dmel_CG5753 (stau)
SSDB
Motif
Pfam: dsrm Staufen_C Dicer_dsRBD
Other DBs
NCBI-GeneID: 37065
NCBI-ProteinID: NP_476751
FlyBase: FBgn0003520
UniProt: P25159
Structure
Position
2R
AA seq 1026 aa
MQHNVHAARPAPHIRAAHHHSHSHAHMHLHPGMEQHLGPSLQQQQQPPPPPQQPPHRDLH
ARLNHHHLHAQQQQQQQTSSNQAGAVAAAGAAYHHGNINSNSGSNISSNSNQMQKIRQQH
QHLSSSNGLLGNQPPGPPPQAFNPLAGNPAALAYNQLPPHPPHHMAAHLGSYAAPPPHYY
MSQAKPAKYNHYGSNANSNSGSNNSNSNYAPKAILQNTYRNQKVVVPPVVQEVTPVPEPP
VTTNNATTNSTSNSTVIASEPVTQEDTSQKPETRQEPASADDHVSTGNIDATGALSNEDT
SSSGRGGKDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLMLGDEEYSADGFK
IKKAQHLAASKAIEETMYKHPPPKIRRSEEGGPMRTHITPTVELNALAMKLGQRTFYLLD
PTQIPPTDSIVPPEFAGGHLLTAPGPGMPQPPPPPAYALRQRLGNGFVPIPSQPMHPHFF
HGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLFVGKQKFVGIGRTL
QQAKHDAAARALQVLKTQAISASEEALEDSMDEGDKKSPISQVHEIGIKRNMTVHFKVLR
EEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPTKQTPLKRI
KVKTPGKSGAAAREGSVVSGTDGPTQTGKPERRKRLNPPKDKLIDMDDADNPITKLIQLQ
QTRKEKEPIFELIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFELLE
AVQVTPTNETQSSEECSTSATMSAVTAPAVEATAEGKVPMVATPVGPMPGILILRQNKKP
AKKRDQIVIVKSNVESKEEEANKEVAVAAEENSNNSANSGDSSNSSSGDSQATEAASESA
LNTSTGSNTSGVSSNSSNVGANTDGNNHAESKNNTESSSNSTSNTQSAGVHMKEQLLYLS
KLLDFEVNFSDYPKGNHNEFLTIVTLSTHPPQICHGVGKSSEESQNDAASNALKILSKLG
LNNAMK
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgcagcacaacgttcatgccgcccggccagcgccccacatccgagctgcgcaccatcac
agccacagccatgcccacatgcatctgcatcccggcatggagcagcacctgggccccagt
cttcagcagcaacagcagccgccaccgccgccccagcagcctccacatcgcgacctccac
gcacgtctgaatcatcaccatctccacgctcagcagcagcagcagcaacagacgtcgtcg
aaccaagccggcgccgtcgctgcggctggggctgcctatcaccacggcaacatcaacagc
aacagcggcagcaacatctccagcaacagcaaccagatgcagaagatccgccaacagcac
cagcacttgagtagcagcaacggccttcttggcaatcaacctcctggtccgccgccacag
gccttcaatccattggcgggcaatccggcagctctcgcctacaatcagcttcctccgcat
ccgccgcaccacatggccgcccatctgggcagctatgccgctccaccgcctcactattac
atgagccaggcgaagcccgcgaaatataatcactatggcagcaatgcaaacagcaacagc
ggcagcaacaacagcaacagcaactatgcccccaaggccatactgcagaatacgtatagg
aatcagaaggtggtggttccaccagtggtgcaggaagtaacccccgtgccggaaccgcca
gtgaccaccaataatgccaccaccaacagcaccagcaacagcacagtcatagctagcgag
cctgtaacccaagaggatacttctcagaagccggagactagacaggagccagcttcagcg
gacgatcatgtcagcacggggaatatcgatgctacgggagcactgtccaacgaggacacg
agcagttcaggacgcgggggcaaggacaagaccccaatgtgcctggtcaatgagttggcc
aggtacaacaagatcacgcatcaatatcggttgactgaagaacgaggacctgcccactgc
aagaccttcacggtgacactgatgctgggcgatgaggagtactcggcggacggtttcaag
attaagaaagcgcaacatttggcggctagtaaggctatcgaggaaaccatgtacaagcat
ccgccgccgaagattcgccgcagcgaagaaggcggtcccatgcgcacacacattacgccg
acggtggaattgaatgccctggccatgaagttgggacagcgtaccttctacctgctggat
cccactcagattcctcccacggattccatagtgccgccggagtttgccggcggtcattta
ctaactgcgccaggaccagggatgccgcaaccacctccaccacctgcttacgctctccgc
cagcggcttggcaatggattcgtgcccattccatcgcagccgatgcatccgcatttcttt
catggaccaggtcagcgaccgtttcctccgaagtttccatcacgctttgcgctgccaccg
cctctcggagctcatgtacatcatggaccgaatggcccatttccatccgtgcctacgcca
cccagcaaaatcaccctgtttgtgggcaagcagaagtttgtgggcatcggacgcacactg
cagcaagcgaaacatgacgctgcggcgagagcgctgcaggttctcaagacacaggccata
tctgcctctgaggaggctctcgaggattcgatggatgagggtgacaagaagtcgcccatc
tcgcaggttcacgagatcggaattaagcgcaacatgaccgttcattttaaggtgttgcgc
gaggaggggccggcgcacatgaagaactttataacagcctgcattgtgggatctattgtc
accgaaggagaaggaaatggcaaaaaagtgtccaagaagcgtgccgcggaaaagatgctc
gtcgagttgcaaaagctgccgccccttacgcccaccaagcaaacgccattgaagcggatt
aaggttaagacacccggcaaaagtggggcagctgcccgagaaggttcggttgtgtcgggc
actgatggtcctacgcaaacgggcaagccggagagacgtaaacgcctcaatccgccgaag
gacaagctgatagacatggacgatgcggataatcccattacaaagctaattcaactgcag
cagacgcgtaaggaaaaggaacccattttcgagctgatagccaaaaacggcaatgaaacc
gctcgacgacgggaattcgttatggaggtctccgccagcgggagcacagcccgtggaaca
ggcaacagcaagaagttggcaaagcgaaatgctgcacaggctctgtttgaactgctggaa
gctgttcaagtcacaccaaccaacgaaacacagtcatcggaggaatgcagcacttcggca
acaatgtccgccgttacagcgcccgcagtggaggcaactgcggaaggcaaagtgcccatg
gtagcaacgccagtgggtcccatgccaggcattttaatactgcgccagaacaagaaacca
gcaaagaagagggatcaaattgtaattgtcaagtctaacgtggaatccaaagaggaggag
gccaataaggaggtggcagttgcagctgaggagaatagcaacaacagtgcaaactctggc
gacagcagcaacagcagcagcggcgattcgcaagccacagaggcggctagtgagagtgca
ctgaatacctcaaccggcagcaatacgagtggtgtgagtagcaacagcagcaatgttgga
gccaacacggatggtaacaaccatgccgagagtaaaaacaacacggagagtagcagcaac
agtacgagtaacacacaaagcgctggtgtgcacatgaaggagcagctcttgtaccttagt
aaactgctggactttgaggtcaacttctcggactatccgaaaggcaatcataacgagttc
ctgaccatcgtgacattgtccacacatccgccgcagatctgccatggcgttggcaagagc
tccgaggagtcgcagaatgatgctgcaagcaatgccttgaaaatcctcagcaagctgggg
ctcaacaatgccatgaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
3D Structure (3)   
   PDB (3)   
Protein domain (3)   
   Pfam (3)   
All databases (92)   

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