KEGG T00030: Dmel

Drosophila melanogaster (fruit fly): Dmel_CG6920

Entry

Dmel_CG6920 CDS T00030

Gene name

Blm

Definition

Bloom syndrome helicase ortholog (EC:3.6.1.3)

Orthology

K10901

bloom syndrome protein [EC:3.6.4.12]

Organism

dme Drosophila melanogaster (fruit fly)

Pathway

dme03440	Homologous recombination
dme03460	Fanconi anemia pathway

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:dme03440]
Genetic Information Processing; Replication and repair; Fanconi anemia pathway [PATH:dme03460]

SSDB

Motif

Pfam:

RQC DEAD Helicase_C HRDC Helicase_Sgs1 DUF1682

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

Position

3R:86E17-86E17

AA seq 1487 aa
MSKKPVAQRKQLTLSSFIGLDGNSQSQPKSRAASVRSKPPAVYNPIFLDASSSDDETTEI
SSQSNNGTIATKKSSRDPRTAKLKKHTYLDLSVSPLAKLSAKKYARDSPKKPTSLDLSVS
PLAELLAKKSDRDSPKKPVQNENSYTYRGLSESPVENKSIGDTLRKPPQKERKTSIVWLS
DSPEKKVTQNERKILDSPLQRFSFEDFPNKENGNRHHLLTLPDSPPPPQPVKKPEKTMWQ
NETKTIQDKDSPANPLVSNNLASISTLLDSSRAPNTYKGSSRNLFEDSPEKSGSGEQGYK
LGSAKENEIPTKPATASLERNSVTSSPSPAAPLKPRYSVAFDNSLADYLKDLAQNDNFSI
DPNKQNTETLKSTLGFFRNTYVELMEKYCSLIDQIPAMHFNEIAGFQPNTFLKLKVMRQK
FKARTQLVQNSLDKKESQLKAEQEALEKEEIEMQAEQAQQTVLSSSSPEKSRPIMPLPKV
QEIKDEKIPNRNQLIHDLCGEPDNFSPPSSPRDTQLIPKRQQLINDLCGEPDDFSPPSKQ
NDPHLLRKCEELVHDLCEEPDDYLAQSMMLDGDLEEEQLNGPTQGTTTSGMDDDEDDLEG
LLAEIEDEHQKMQGRRSEFNGYSYKELEAVKVKEKHKETPINISLDDDGFPEYDEAMFEQ
MHSQAAANKSRVSSAGPSTSKSVVPTKQTSALHSQKLSGNFHANVHNDGITGEFDGQKFE
HSTRLMHGLSYSFGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVT
IVISPLKSLIFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKI
SSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALT
ATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKPQHFS
GIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTGKMRVICATVAFGM
GIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKMLDSDKAL
QYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETACDNCINKRAY
KAVDALEHARKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIIDFNHHKTPHHGVLKDW
DKNDVHRLLRKMVIDGFLREDLIFTNDFPQAYLYLGNNISKLMEGTPNFEFAVTKNAKEA
KAAVGSVSDGATSSTADGQSGMREIHERCYTDLLDLCRTIASQRNVTMASIMNIQALKSM
AETLPITEKDMCSIPHVTKANFDKYGAKLLEITSNYASEKLLMQAVLDEEEEQAAAKQRP
STSGWNNESVDWDMAVASQGNANTSGASGFNSFRAGKRKKIYKSGASKRYKTSTTSPAAR
KTTSARGRGGRAGAKRAESSASSASGWKSKKTGNSFGFDLMPLPGSK

NT seq 4464 nt +upstreamnt +downstreamnt
atgtccaagaagcctgtcgcgcaaagaaaacagctcacacttagcagcttcattggcctg
gatggcaattcccagagtcaacctaagagcagagccgcaagtgtcagaagcaagcccccc
gcagtctacaatcccatctttctggacgcgtcctcatccgacgatgaaactacggagata
tccagtcaatccaacaatggcactattgctacgaagaagtccagcagagatcctagaacc
gcaaagctcaaaaaacacacatacctcgatctgtcagtgtccccactagctaaactttct
gccaagaaatatgccagagattcgcccaaaaagcccacatccctcgatctgtcagtgtcc
ccactagctgaacttcttgccaaaaaatctgacagagattcgcccaaaaagccagtacag
aatgagaatagttacacctatcggggattgtcggaatctcctgttgaaaataaatcaatt
ggcgatacactaaggaaaccacctcaaaaagagaggaaaacatcaatagtttggctttcg
gattctccggaaaagaaagtgacgcaaaatgagaggaagatcctagactctccactccaa
aggttctccttcgaggactttccaaacaaagaaaatggaaatagacatcacctactcaca
ctgcctgattcgccgccccctccgcagcctgtcaagaaaccggagaaaactatgtggcaa
aatgaaacaaaaacgattcaggataaggactcccctgcaaacccattagttagcaacaat
ctggcctccatttcgactctgcttgactcatcgcgggctcctaatacatataaaggcagt
agtcgtaatctttttgaggattctccagagaaaagtggcagcggggagcaaggctataaa
ctgggttcagcgaaagaaaatgaaatcccgacaaagcctgcgaccgcttctctggaaaga
aatagcgtcacctcctctccatcaccagcggcaccattgaagcccagatacagtgtggct
tttgacaattctctggctgattacttaaaggacttggcccaaaacgacaacttcagcatc
gatcccaataaacagaatactgagacactgaagagcacgcttggattctttcgcaacact
tatgtggagctaatggaaaaatattgctctctgattgaccagattcccgccatgcacttc
aatgaaatagcaggctttcagccgaatacgtttctcaagctcaaagtaatgcgacaaaaa
tttaaagcgcggacacagcttgtccaaaacagtttagataagaaagaaagtcagctaaaa
gcggaacaggaagcccttgagaaggaggaaatagaaatgcaggcggaacaggctcagcag
actgttttatcatcatcttcaccagagaaaagtcgcccgataatgcccctgccaaaagtt
caagaaatcaaggatgaaaaaatacccaatcggaatcagcttatacacgacctttgcgga
gagccagacaatttctctccacccagctcgccgcgcgatacgcaacttattccgaaacgc
cagcagctcatcaacgacctttgcggggagccggatgacttctcaccaccgagcaaacaa
aatgatccgcacctgctgcgaaagtgcgaagaacttgtccatgacctttgcgaggaaccg
gacgactacttagcacagagcatgatgctagacggcgacttggaggaggaacaactgaac
ggacccacgcaggggacgacaaccagcggaatggatgatgacgaagatgacttggaggga
ttgctggcggaaatcgaggacgagcatcagaagatgcagggccgcaggtcagagttcaat
ggttacagctataaggagttggaagctgtcaaagtaaaggagaagcacaaggagaccccg
ataaatatttccttggatgatgatggatttcccgagtacgatgaggctatgtttgaacaa
atgcattcccaggctgctgccaataaaagcagagtgagcagtgccggcccaagcaccagt
aagagcgttgtgcctaccaagcaaaccagtgccctgcactcccaaaagctgtcagggaat
ttccatgcgaacgtgcacaatgacggcatcaccggggagttcgatggtcaaaagtttgag
cactccacccgcctcatgcacggactgagctacagctttggtctaaaaagtttccgtccc
aatcagctgcaggtgatcaacgccacgcttctgggcaatgactgcttcgtcctgatgcca
actggtggaggaaagtcgttgtgctatcagctgcctgccattctgaccgagggagtgacc
attgttatcagtccgctgaagtcgctgatctttgatcaaatcaataaactggcttcccta
gatatctgtgcaaagagtctgagcggagaacaaaaaatggccgatgtcatggccatctac
agggatttggagtctcagccacctatggtcaaattgctctacgtgacacctgagaaaatt
agcagttctgctcgcttccaggacactctggacacgcttaattccaacaactatataagt
agattcgttatagacgaggcccattgcgtttcccagtggggtcatgactttagaccggac
tacaaaaagcttggagtactaaagaagcgttttccaaatgtgcctactattgcgttaaca
gctacagccacgccccgcgtccgcttggatattctggcccaactaaatctgaagaactgc
aagtggttcctctccagttttaatcgcagcaacctacggtacagggtactgcccaaaaag
ggcgtctcgacgttggacgacattagcaggtacatccgcagcaaaccgcagcacttcagt
ggcataatctactgcctgtcgcgcaaggagtgcgatgagacgtcaaagaaaatgtgcaag
gatggcgtccgggcggtatcctatcatgctggtctcacggacactgaccgtgagagtcgg
caaaaggattggctgaccggaaagatgagggtaatctgtgccaccgtcgccttcggcatg
ggcatcgacaagccagatgtccgatttgttttgcactactcactgcccaagtccattgag
ggttattaccaagaggcaggtcgcgcgggccgagacggtgacgtggctgattgcatcttg
tactacaactattcggacatgctcagaatcaagaaaatgctggactccgacaaagctctt
cagtacaatgtgaagaagatacatgtagacaatttatatcgcattgttgggtactgtgaa
aatctcacagattgccgacgtgcccagcagttggactattttggggagcactttaccagc
gaacaatgtctggagaatagagagacagcttgcgataattgcattaacaaacgagcctat
aaggcggtagatgcattggagcatgctcgtaaggctgcacgagcagtcaaggatctgtgc
agcggtagatcccgtttcacactattgcatattgccgacgtactgaaaggttcgaagatc
aagaaaatcattgactttaaccatcacaaaacgccacaccatggcgtcctgaaagactgg
gacaagaacgatgtacacaggctgctgcgcaaaatggtcatcgatggtttccttagggaa
gaccttatatttacgaacgattttccacaggcctatttgtatctgggcaacaacatcagt
aaactaatggagggcacgcccaacttcgagtttgcagtgaccaaaaatgccaaggaagcc
aaggcggcagttggcagcgtttccgatggtgcaacgagcagtaccgctgatggacagtcg
ggaatgcgggagattcacgagcgttgctatacagatctattggatctatgtcgaaccatt
gccagccagcgaaacgttaccatggctagtatcatgaacattcaggccctgaagagcatg
gccgaaacactaccaatcaccgagaaggacatgtgcagcattccgcacgtgaccaaggcg
aactttgataaatacggcgccaagctgctcgaaatcactagcaactatgcatcggagaag
ctgctgatgcaagccgtcctggacgaagaggaggaacaggcggccgccaagcagaggccc
agtacatccggctggaataacgaaagcgtggactgggacatggcggttgcctcacagggc
aatgcaaacacgagcggtgccagcggtttcaactcgtttagagcgggcaaaagaaaaaag
atatacaagtcaggggccagcaagaggtacaaaacgagtactacatcgccagcggccagg
aagacaacatcagccaggggtcgcggtggtagggctggcgccaaacgagcggagagttca
gcttcgtcagcgtcgggctggaagtccaagaaaacagggaatagctttggcttcgattta
atgccactgccaggatcaaaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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