KEGG   Desulfosporosinus meridiei: Desmer_0006
Entry
Desmer_0006       CDS       T02207                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
dmi  Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:dmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dmi03032]
    Desmer_0006
   03400 DNA repair and recombination proteins [BR:dmi03400]
    Desmer_0006
Enzymes [BR:dmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Desmer_0006
DNA replication proteins [BR:dmi03032]
 Prokaryotic type
  DNA Topoisomerases
   Desmer_0006
DNA repair and recombination proteins [BR:dmi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Desmer_0006
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AFQ42116
UniProt: J7ITU8
Position
5016..6950
AA seq 644 aa
MQENKEQLVQTISDNYNAGQIEVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEIVDNSIDE
ALAGFCNEIDVIIHQDNSITVVDNGRGIPVDIHPKTGKPGVELALTVLHAGGKFGGSESA
YKVSGGLHGVGLSVVNALSKWLVVEVSKGGHVYHQEYSIGKPTTKLINVGETNKSGTKIS
FMPDSEIFEETVYDFNILAHRLRELSFLNKSVTINLTDERTDVKETFLHTGGIQDFVRYL
NKNKDCLHPQPIFIETLKDSVQVEVCMQYNDGYAENLFSYANNINTQEGGTHEAGFKSAL
TRVVNDYARKNNMIKAGDSNLTGDDIREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIV
DSATGEGLSTFLEENPSIARKFIDKSVQAARARDAARKARELTRRKSALEGTSLPGKLAD
CSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAILPLRGKIINVEKARLDKILGNTEIRA
MITAMGTGISDDFDIEKARYHKLIIMTDADVDGAHIRTLLLTFFYRYMKPLIENNFVYIA
QPPLYKVKKGKDIQYVYTEPELTKVLEKIGRDKVEIQRYKGLGEMNPEQLWETTMDPAKR
TILRVTMEDAMRTEEMFSVLMGDKVEPRRDFINRYAKDVRNLDA
NT seq 1935 nt   +upstreamnt  +downstreamnt
ttgcaagaaaacaaagagcaactagttcaaactattagtgacaattataatgcggggcaa
atcgaagtgcttgaaggtttagaagctgttcgtaaacgtcctggaatgtatattggtacc
acaggtcctcgtggtcttcatcatcttgtttacgaaattgttgataatagcattgatgaa
gccttagctggcttttgtaatgaaattgatgtcataattcatcaagacaacagtattaca
gtagttgataatgggagaggaattcccgtcgatatccatcctaaaacaggtaaaccgggt
gttgaacttgcattgacagtgttacatgccggaggaaaattcgggggaagcgaaagtgcc
tataaagtttccgggggtctgcatggagtaggtttaagtgtcgttaatgctttatcaaag
tggttggttgtagaagtttccaaaggtggacatgtttatcatcaggaatactcaattggt
aaaccaacaaccaaactgataaatgttggagaaaccaataaaagtggtactaaaatatct
tttatgcctgattcggagatcttcgaagagacagtatatgattttaatattttggcccac
cgccttagagaactgtcatttttaaataagagtgtaacaattaatttaacggatgagaga
actgacgttaaagagacatttttacatacaggtggtattcaagactttgttcgttatctt
aataaaaacaaggactgcctacatcctcaaccaatatttattgaaaccttaaaagatagt
gttcaagtcgaagtttgtatgcaatataatgatggttatgccgaaaatttgttttcttat
gccaataatattaatacccaagaaggtggaacccatgaggctggttttaagtctgcatta
acacgagtagttaatgattacgcaagaaaaaacaatatgattaaagccggtgattccaac
cttacgggagacgacataagagaaggattgacagcagttatatctgtcaaagtacctgat
ccacaatttgaagggcaaactaaaacaaaacttggaaatagtgaaattcgtggaattgta
gattctgccacgggcgaagggttatcgactttcctagaggagaatccctcaattgccaga
aaatttattgataagtctgttcaagctgcccgagcacgtgacgctgctcgtaaagcaaga
gagttaactcgtcgaaagagtgccttagaaggaacttctcttcccggcaaacttgctgat
tgctcttggaaggaaccggatttatgtgaaatgtatattgtcgaaggagatagcgctggg
ggttcagcaaaacaaggtagggatcgtcgctttcaagctattttgccattacgaggaaaa
attattaacgtcgaaaaggccaggcttgataaaatattaggaaatactgaaattcgagct
atgattaccgctatgggtactggaatatccgatgattttgatattgaaaaggctcgttac
cacaaattaattattatgaccgatgctgacgtcgatggtgctcacattcggaccttacta
ttaaccttcttttaccgttacatgaaacccttaatcgaaaataattttgtatatattgct
caaccccctctttacaaggttaaaaagggcaaagatattcaatatgtctatactgaacct
gaattaacaaaggttcttgaaaaaataggtcgggataaagtggaaattcaacgctataaa
ggtttaggagaaatgaatcctgaacaattatgggaaaccaccatggatcctgccaaaaga
actattctaagagtgactatggaagacgctatgagaacggaagaaatgttctcggtgtta
atgggtgataaagtggaaccccgtcgtgacttcataaatcgctatgctaaagatgttcgt
aatctagatgcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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