KEGG   Desulfosporosinus meridiei: Desmer_0925Help
Entry
Desmer_0925       CDS       T02207                                 

Definition
(GenBank) Holliday junction DNA helicase subunit RuvA
  KO
K03550  holliday junction DNA helicase RuvA [EC:3.6.4.12]
Organism
dmi  Desulfosporosinus meridiei
Pathway
dmi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dmi00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    Desmer_0925
Enzymes [BR:dmi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.12  DNA helicase
     Desmer_0925
DNA repair and recombination proteins [BR:dmi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Desmer_0925
    RecFOR pathway proteins
     Desmer_0925
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: HHH_5 RuvA_N RuvA_C HHH 5_3_exonuc HHH_2 DNA_pol_lambd_f UBA Transposase_20 IMS_HHH HHH_3 HHH_8 KRAP_IP3R_bind HHH_4 Cdd1
Motif
Other DBs
NCBI-ProteinID: AFQ42949
JGI: DesmerDRAFT_0925
UniProt: J7IRY5
Position
968279..968881
Genome map
AA seq 200 aa AA seqDB search
MIGMLRGKVWEIQGERLVMDVQGTGYLLTVPYGLLAKIHPGQELIVYTHVVMREDDLSLY
GFSSFEEKQLFLQMLSVSGIGPKAAISLLSTFGAIQIESAIASENLNLLTKVPGIGKKTA
QRLILELKEKFKGHNLAANESGSFSEPLSQSHSEAQETLLALGFGLEEARQALSRALKDG
GELTTEEQVKKALRFLASGH
NT seq 603 nt NT seq  +upstreamnt  +downstreamnt
atgattggaatgttgcggggcaaggtttgggaaatccaaggtgagcgtttagtgatggat
gtacagggcactgggtacctgctgacggttccctatggacttttagcaaagatacacccc
gggcaagaacttatcgtctacactcacgtggttatgcgtgaagacgatttatctctttac
ggtttttcttcatttgaagagaaacagctctttcttcaaatgttaagtgtttcaggaatt
ggtcccaaagcagctatatccctactttcaacctttggagcgatacagattgaaagcgcc
attgcaagtgaaaatcttaacttgttaacaaaggttcctggtatcggaaaaaagacagcc
cagcggctaattctagaactgaaagagaaatttaaagggcataatttagctgctaatgaa
agcggttcgttttctgaacccttgtctcagagtcactctgaagctcaggaaaccctactg
gctttaggatttggcttggaggaagcacgtcaggctctgagccgggccttaaaagacggc
ggggaattgacgacggaggagcaagtaaagaaggcactgcgttttctcgcctccgggcac
taa

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