KEGG   Desulfosporosinus meridiei: Desmer_2086Help
Entry
Desmer_2086       CDS       T02207                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dmi  Desulfosporosinus meridiei
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dmi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Desmer_2086
Enzymes [BR:dmi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Desmer_2086
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Desmer_2086
DNA repair and recombination proteins [BR:dmi03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Desmer_2086
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
2190001..2190906
Genome map
AA seq 301 aa AA seqDB search
MPEVPEMEIYKNYLNQWVKGKEISELNILRAKSINLELSEFRAKVQGKRIKEIRRRGKYL
IFDFEEGDFLLTHMMLDGRLFLLQLDSETLKKTDSPKAEDLQSVIMGSSAEELKNIVKDL
PGRASVIFGLSGGLILFFCNLTLGYLHYLDQVHLDTKLQELGKDPLDPDFNSRDFSKLLK
GKRGMIKPWLMNPKNISGVGNAYSNEALFSAGILPTRGVSTLDDAEKENLFDSLVRIIRD
SIRLGGDMEEPFAAWDDFTGGYNPYFKVYDRTGKPCLVCGEDIQKSEVGGRNAFFCPHCQ
K
NT seq 906 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaagttcctgaaatggagatctataaaaattacttaaatcaatgggtcaaaggg
aaggaaattagtgagctaaatatcttacgagccaaaagcattaacctggagttatcagaa
ttccgcgctaaggtacagggcaagagaattaaagaaattaggcggcggggtaaatattta
atttttgattttgaggaaggcgattttttactgacccatatgatgcttgatggccggcta
tttctcttgcaacttgactccgaaaccctcaaaaagaccgatagcccaaaagcggaagat
ttacagtctgtgatcatggggagcagcgcagaagagttgaagaacatcgttaaggatctt
ccgggaagagccagtgtcatttttggactatccggtggtttgatactctttttttgtaat
ctgaccctgggctatttgcactaccttgatcaagttcatctggatacgaaattgcaggaa
ttaggaaaggatcctttagacccggatttcaacagccgggacttttctaaattgctgaaa
gggaaaaggggaatgatcaaaccttggttgatgaaccctaaaaacatctccggcgtagga
aatgcttattctaatgaagctttattcagtgcaggtatactgccaacccgaggagtttcg
acattagatgatgctgaaaaagagaacctatttgattccttggtcagaattattagagat
tctattcgccttggaggagacatggaggaaccctttgccgcttgggatgactttacaggg
ggatataatccttactttaaagtttatgatcgcacagggaaaccctgcttagtatgtggg
gaggatattcaaaagtcggaagtaggggggcggaatgcctttttttgccctcactgtcag
aagtag

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