KEGG   Drosophila mojavensis: Dmoj_GI12214Help
Entry
Dmoj_GI12214      CDS       T01062                                 

Definition
(RefSeq) GI12214 gene product from transcript GI12214-RA (EC:3.6.1.3)
  KO
K03144  
transcription initiation factor TFIIH subunit 4
Organism
dmo  Drosophila mojavensis
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:dmo00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    Dmoj_GI12214
  Replication and repair
   03420 Nucleotide excision repair
    Dmoj_GI12214
Transcription machinery [BR:dmo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Dmoj_GI12214
DNA repair and recombination proteins [BR:dmo03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Dmoj_GI12214
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
FlyBase: 
UniProt: 
Position
Unknown
AA seq 524 aa AA seqDB search
MYCVSKLNCKKSISGTITHRREIVKQIRAHRSMADTKSGRHASTSAATPLLVQSPENLEC
KNFQEYLRTRQTPESLEKLYSYPPICLAVFRELPEIARQFVIRILFVDQPVPQAVVSSWG
AQRVAKEQLEATNCLSALSVWRVTAIPGGLAAWELSPTFKKSVRQVLLGGGKPWAITNSL
ERDSKPRDVAFLDAYAMSRWRCVLHYMVGTGNRSNTETEAISPDAVRILLHANLMKRDER
EGITITRQGFQFLLLDTRAQVWHFMLQYLDTCQERGLVLAECLSMLFQLSFSTLGRDYSS
EGMNKQMLMFLQHLREFGLVFQRKRKEHRFYPTRLALNVTNKEAAEASISVDEERMQERG
YIVVETNYRVYAYTDSQLQVAVLGLFTELLYRFPNLVVGVLTRDSVRQALRGGITAEQIV
SYLEQYAHPNMKLVESAIQSKSCLPPTVVDQIKLWEMERNRFTYTEGVVYNQFLSQNDFV
TLRDYAQSQNVLVWQNERTRTMVVQKNGHDDVKRYWKKYSKSAG
NT seq 1575 nt NT seq  +upstreamnt  +downstreamnt
atgtattgtgtatcaaagttaaattgcaagaaatcgattagcggcacgataacccacaga
cgcgaaattgttaaacaaatacgggcgcatcgttccatggccgatacaaaatccggccgt
catgcgagcaccagcgctgcaactccacttctggtgcagagccccgagaacctggagtgc
aagaactttcaggaatatctgcgcacccgccagacacctgaatcattggagaagctctac
agttatccacccatttgcctagctgtcttccgcgagttgcctgaaattgcaagacaattt
gtgattcgtatactgttcgtcgaccaacccgtaccacaggccgttgtcagctcatggggc
gcccaacgtgtggccaaggaacaactggaggcaaccaactgcttgtctgccttatctgtt
tggcgtgtgacagccataccaggtggactagctgcctgggagctatcgcccacatttaag
aagagcgtgcgccaagtgttgttaggtggaggaaagccctgggcaattaccaattcgctc
gagagggactccaagccacgggatgttgcattccttgacgcgtatgccatgtctcggtgg
cgttgtgtgctgcattacatggtgggtacgggaaatcgaagtaacaccgaaactgaggcc
atcagtccagatgccgtacgcattctactccatgcaaatcttatgaagcgcgatgagcgg
gagggcattaccatcacacgtcaaggatttcagttcttgcttctggacacacgagcccag
gtctggcatttcatgctgcagtatttagatacgtgccaggaacgtggcctggtcttggcc
gagtgtctgtctatgctctttcaattgagcttctctacgctggggcgcgactacagctct
gaaggcatgaacaagcagatgctgatgtttctccagcacctgcgggagttcggcctggta
tttcaaaggaaacgcaaagagcatcgcttttatcccacgcgattagcgttaaatgtaact
aacaaggaagcagcagaagcatccatttcggtggatgaagagcgcatgcaggagcgaggc
tacattgtggtggagaccaactatcgcgtatatgcctacacagactcccagttgcaggtc
gctgtgctgggccttttcaccgagctgctctatcgatttcccaatctcgtagtaggcgtg
ctcacccgagactctgtgcgtcaagctctgcgaggcggcattacggccgagcaaatagtc
agctatttggagcagtatgcacatcccaacatgaaattggttgagtctgcaattcaatca
aaatcctgcctgccacccaccgtcgtggaccaaatcaaactgtgggagatggaacgcaat
cgtttcacctacaccgagggcgtcgtctacaatcagttcctctctcagaatgacttcgta
acgctgcgcgactacgcccaatcccagaatgtgttggtctggcaaaacgagcgcacccgc
accatggtcgtgcaaaagaatggccacgacgatgtcaagcgctattggaagaagtactca
aagagcgccggctag

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