KEGG   Dermacoccus nishinomiyaensis: HX89_05755
Entry
HX89_05755        CDS       T03223                                 
Name
(GenBank) DNA-binding protein
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
dni  Dermacoccus nishinomiyaensis
Pathway
dni03030  DNA replication
dni03430  Mismatch repair
dni03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HX89_05755
   03430 Mismatch repair
    HX89_05755
   03440 Homologous recombination
    HX89_05755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dni03032]
    HX89_05755
   03400 DNA repair and recombination proteins [BR:dni03400]
    HX89_05755
Enzymes [BR:dni01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HX89_05755
DNA replication proteins [BR:dni03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HX89_05755
DNA repair and recombination proteins [BR:dni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HX89_05755
SSDB
Motif
Pfam: DNA_pol3_delta_C DNA_pol3_delta DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: AIF40526
UniProt: A0A075JDZ5
Position
1210043..1211014
AA seq 323 aa
MSDVPQIILVTGPERILAQRAVEESLEAITAAHPEAEIVRIDVAEYQPGRLTTELSPSLF
GGRRVIVVRDFDEAPDALVDELEDALKVGLDEANLIVLHKGGNRAKRVLDALKKAKARVI
EAPAIKSDRDKSAFVMNEFRRARRRITPEGVRALLEAAGKDTSELAAACRQLVDDTSGIV
DENTVGTYHGGKVEATGFRVADATVAGNAPEALRLLRHAFASGVDPVPIVAVLASQLRQV
AKVASAGGGRSADLAKQLGMPLWQVDKARTASRGWDGVRLGRAIQAVAAADFAVKGGGRD
PQYAVEHVVLEICRQRHAPSERR
NT seq 972 nt   +upstreamnt  +downstreamnt
atgagcgacgtcccgcagatcatcctcgtcaccgggcctgagcgcatcctcgcccagcgc
gccgtcgaggagagcctcgaggccatcacggccgcgcacccggaggccgagatcgtgcgc
atcgacgtcgccgagtaccagcccgggcgtctcacgacggagttgtcgccgagcctgttc
ggtgggcgccgcgtcatcgtcgtgcgtgacttcgacgaggcgccggacgcccttgtcgac
gagctcgaggacgcgctgaaggtcggtctcgacgaggccaacctcatcgtgctgcacaag
ggcggcaaccgcgccaagcgcgtgctggatgcgctcaagaaggcgaaggcgcgcgtcatc
gaggcgccggcgatcaagtcggatcgtgacaagtcggcgttcgtcatgaacgagtttcgt
cgcgcacgccgccgcatcacacccgagggcgtgcgggcgctgctcgaggcggccggcaag
gacacctcggagctcgccgcggcgtgccgtcagctcgtcgacgacacgagcggcatcgtc
gacgagaacaccgtcggcacctaccacggcggcaaggtggaggcgacgggcttccgcgtg
gccgacgcgaccgtcgccggcaacgcgcccgaggccctgcggctgctgcgccacgcgttc
gcctccggggtcgatcccgtgccgatcgtcgccgtcctcgcctcgcagctgcgccaggtc
gccaaggtcgcctcggccggcggtggacgcagtgcggatctcgcgaagcagctggggatg
ccactctggcaggtcgacaaggcgcggacggcgtcgcgcggatgggacggcgtccgtctc
ggacgtgcgatccaggccgtcgccgcggccgacttcgccgtcaagggtggtggacgcgat
ccgcagtacgccgtcgagcacgtggtcctcgagatctgccgtcagcgccacgcgccgagc
gagcgtcgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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