KEGG   Dichelobacter nodosus: DNO_0408
Entry
DNO_0408          CDS       T00517                                 
Symbol
recD
Name
(GenBank) exonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
dno  Dichelobacter nodosus
Pathway
dno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DNO_0408 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dno03400]
    DNO_0408 (recD)
Enzymes [BR:dno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DNO_0408 (recD)
DNA repair and recombination proteins [BR:dno03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DNO_0408 (recD)
SSDB
Motif
Pfam: AAA_30 AAA_19 AAA_11 UvrD_C_2 SH3_13 Viral_helicase1 UvrD-helicase SLFN-g3_helicase Helicase_RecD AAA_22 PhoH Herpes_Helicase UvrD_C PIF1 AAA_5 DEAD IstB_IS21 AAA_16 ResIII nSTAND3 Terminase_6N NACHT
Other DBs
NCBI-ProteinID: ABQ13585
UniProt: A5EVY1
Position
450954..452528
AA seq 524 aa
MPINDTDKNHFIGAFLAQRAGGCSENFVPHFERVMTAIAAGNTVVAAENAIADGALIVTA
DAAKKGAVAPLVSDGTFLWLYRLWFQEWRLASCIQKKLNAADDSILEHNSFDDGLNAEQK
QALKMGLTRQLSIINGGPGTGKTFTVARIVAALLARDPDLTIALAAPTGKAAQRLEIALH
QAFITAQLTRPTQLTTAQTVHRLLGVDNTGTARYHEHYFLPYDVVIIDEASMLSLELAAQ
LFQALAPHTRIILLGDAQQLAAVEAGAVLHDLAQQSALNHHVVTLQESRRFHQTSGIGIL
ARCTQNASQTALTAALEHEDIALSPLARRPNYDRLYEPYRDYVAKVAAGAAVDVLLQQFD
NYRILTKTRYGAYGTAAVNEQMKKRHLAQMGVNGKRAFYQGAPVMVTRNNYAHGVFNGDI
GICLADERGQMLVYFREDFAVPLLFLKSDDLDFAYALTIHKAQGSEFEQVALLLDKQEEG
LTRELVYTGITRAKKQLLLETTPAILLKAMQTPTQRLTGLSTFF
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgccaatcaatgatacggacaaaaatcattttatcggcgcgtttttagcacaaagggcg
ggcggttgttcggaaaattttgtgcctcattttgaacgcgtgatgacggcaatcgctgcc
ggaaatacggtagttgccgcagaaaatgcgattgccgacggcgcgttaattgtaacggca
gatgcggcaaaaaagggcgcggtggcgccgttggttagtgatggtacttttttatggctt
tatcggctgtggtttcaggagtggcgtttggcgagttgcattcaaaaaaaattaaatgcc
gccgacgattctattttggaacataattcatttgatgacggtttaaatgccgaacaaaag
caagcgcttaaaatgggattgacgcggcaattaagcattattaatggcgggccgggtacg
ggaaaaacgtttaccgtggcgagaatcgttgccgctttattggcacgagatcccgattta
acaattgcattagccgcgccaacgggaaaagcggctcaacgtttggaaatcgcgttgcat
caggcttttataacggcgcaattaacgcgtccgacgcaacttaccaccgcgcagacggtg
catcgtttattgggcgtggataacacgggaacggcgcgttatcacgaacattatttttta
ccgtatgacgtggtgattatcgatgaagcttcgatgctgtcgctagaattagccgcgcaa
ttgtttcaagcgctggcgccgcatacccgcatcattttattaggcgatgcgcagcaatta
gccgcggtggaggcgggcgcggtgttgcatgatttggcgcaacaatcagcgttaaatcat
catgtggtgacgttacaagaatcacggcgttttcatcaaacatcgggcattgggattttg
gcgcggtgcacacaaaatgcatcgcaaacggcgttaaccgcggcgttagagcacgaagat
attgctttatcaccgttggcgcggcgcccgaattatgatcgtttatatgaaccatatcgc
gattatgtggcaaaggtggcggcgggcgcggcggttgatgttttattacaacagtttgat
aattatcgtattttaacgaaaacacgttatggtgcgtacggaacggcggcggtgaatgag
cagatgaaaaagcggcatttagcgcagatgggcgttaacggaaaacgcgctttttatcag
ggcgctccggtgatggtgacgcgcaataattatgcgcacggcgtttttaatggcgatatt
ggcatttgtcttgccgatgagcggggacagatgttggtttattttcgtgaagatttcgct
gtgccgttattgtttttaaaatcggatgatttggattttgcttatgcgttaacgattcat
aaagcacaggggtcggaatttgagcaggtagcgttattgttggataaacaggaagaaggt
ttgacgcgggaattagtttatacgggcattacgcgggcaaaaaaacaattattgcttgag
acgacgccggcaattttattaaaagccatgcaaacacccacgcaacgtttaacaggttta
tccacttttttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (35)   

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