KEGG   Dichelobacter nodosus: DNO_0627
Entry
DNO_0627          CDS       T00517                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
dno  Dichelobacter nodosus
Pathway
dno04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:dno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    DNO_0627 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dno03016]
    DNO_0627 (trmU)
Enzymes [BR:dno01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     DNO_0627 (trmU)
Transfer RNA biogenesis [BR:dno03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    DNO_0627 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C NAD_synthase Asn_synthase ThiI ATP_bind_3 QueC
Other DBs
NCBI-ProteinID: ABQ13164
UniProt: A5EVB4
Position
671285..672415
AA seq 376 aa
MAFVPFQAPQGSTIAVGMSGGVDSSVTAYLLKKQGYDVFGIFMKNWEETFSSGYCSAAED
LEDARDVCQTLDIPLHTVNFVQQYHDRVFQLFLDEYRAGRTPNPDVLCNREIKFAELALY
AQQLGADFLATGHYAQRLQSDNHEAALFKGVDAQKDQSYFLHQITPAQLNKAIFPLGGLQ
KKQVRAIARERGLTTFDKKDSTGICFIGERPFRAFLQQYLPAQKGLMKTPNGEIVGEHMG
LMYYTIGQRQGLGIGGIAGASEEPWYVLEKDLSNNVLIVGQGDHPLLYHRVLIAGQLSWL
NEAPIAGRFYHAKTRYRQSDQKCRVDYAADGRLQLTFEQLQRAITLGQYAVIYDGERCLG
GGVIEARMQGKQDVSS
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcttttgttccttttcaagcgcctcaaggttcaacgattgccgttggtatgtccggc
ggcgttgattcttctgtaacggcgtatttgctcaaaaaacaaggttatgatgtttttggg
attttcatgaaaaactgggaagagacgttttccagcggttattgcagcgcagcagaagat
ttggaagatgcgcgcgatgtttgccaaacgcttgatattccattgcatacggtcaatttt
gtgcagcaatatcacgatcgggtttttcaattatttttagatgaataccgcgccggacgc
acgcctaatcctgacgttttatgcaatcgcgaaatcaaatttgctgaactcgcgctttat
gcccaacaattgggcgccgattttctcgccaccggacattatgcgcaacgtttgcagtct
gataatcacgaagcggcgctgtttaaaggcgttgatgcgcaaaaagatcaatcttatttt
ttgcatcaaatcacgccggcgcagttaaataaagcgatttttcctttaggcggattgcaa
aaaaaacaagtgcgcgctattgcccgcgagcggggtttaacgacttttgataaaaaagat
tccacgggcatttgttttattggtgaacgaccttttcgcgcgtttttacaacaatatttg
ccggcgcaaaaaggtttaatgaaaacgccgaatggagaaatcgtcggtgaacatatgggt
ttgatgtattacaccatcgggcaacggcaaggtttgggcatcggcggcatcgcaggcgca
tcggaggagccgtggtacgttttggaaaaagatctgagtaataatgtgttgattgttgga
caaggcgatcacccgttgttatatcaccgcgttttaatcgctggacaattatcgtggctt
aatgaagcgccgatcgcgggtcgtttttatcacgctaaaacgcgttaccggcaaagtgac
caaaaatgtcgggtggattatgccgccgatggtcgtttgcaattgacgtttgaacaactg
cagcgcgctatcactttaggacaatatgctgtgatttatgacggcgagcgctgtttgggc
ggcggcgtaattgaagcaagaatgcaggggaaacaagatgtctcaagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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