KEGG   Desulfosudis oleivorans: Dole_0542
Entry
Dole_0542         CDS       T00610                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
dol  Desulfosudis oleivorans
Pathway
dol03030  DNA replication
dol03430  Mismatch repair
dol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dole_0542
   03430 Mismatch repair
    Dole_0542
   03440 Homologous recombination
    Dole_0542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dol03032]
    Dole_0542
   03400 DNA repair and recombination proteins [BR:dol03400]
    Dole_0542
Enzymes [BR:dol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Dole_0542
DNA replication proteins [BR:dol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Dole_0542
DNA repair and recombination proteins [BR:dol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Dole_0542
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_30 AAA_5 AAA_22 AAA_19 TIP49 PIF1 Mg_chelatase AAA_18 AAA_16 TsaE nSTAND3 AAA_14 DUF815 DNA_pol3_delta_C ResIII Rad17 AAA_28 Sigma54_activat T2SSE AAA_2 AAA_7 AAA_assoc_2 RNA_helicase APS_kinase AAA_24 ABC_tran Cytidylate_kin SKI IstB_IS21
Other DBs
NCBI-ProteinID: ABW66352
UniProt: A8ZU40
Position
complement(607665..609377)
AA seq 570 aa
MSYLVLARKYRPQTFEEVVEQQQVTRTLTNAIASGRVAHAILFTGPRGTGKTTIARILAK
AMNCEKGPTPTPCCACRSCLEIASGNATDVFEIDGASNNSVDQVRELRGNVKFMPAHSPY
KIYIIDEVHMLSGPAFNALLKTLEEPPAHVMFFFATTEPHKIPVTILSRCQRHDLSFVGI
DPLVAHLETLCEKENIPIEKKSLELIAHEAGGSVRDSLSLLDQVMSSAQGPVSHEMVLEA
LGIIDREVIFGLSGAVLAGDMTGALDILDTVYRGGHDIKRFYAEMLGHFRDLLMVKLGVR
AERLASLPGWAVEKMQAQTRDVTELFLSQAMALMLAEEDRVRFSSQPKIAVEMVFVKLLH
TKPVLPIDTLIQKVDALRKSFAQLAGNGNAPATASKDAAPERNADGAAGVSASRPAQARP
APTENQPRPSSPPPASPLPEETGPVATGTTDPVPLDNAGTWEAILARIDEQYPLLGANLR
NSTLAAMEGGRLEIKVYGSQTNKAILAREQSMENLKQVCCDFFKTDINLAVTYTCDTQPA
QPDKQKPRTAGPDPLVAEALNIFGGTIVNT
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtcctatcttgttcttgcccgcaaataccggccccagacctttgaggaggttgtcgag
cagcagcaggtgacccgcaccctgaccaatgccattgcgtcgggacgggtggcccacgcc
attctgttcaccggtccccggggcaccgggaaaaccaccatcgcccggattctggccaag
gcaatgaactgcgaaaagggccccacgcccacgccctgctgcgcctgccgctcctgcctg
gagatcgcgtcgggaaacgccaccgatgtatttgaaatcgatggcgcctccaacaacagc
gtggaccaggtacgggagcttcgcggcaacgtcaagttcatgccggcccacagcccctac
aaaatctatatcatcgacgaagtccatatgctctccggcccggccttcaacgccctgctc
aagaccctggaagaaccgcccgcgcatgtcatgttcttttttgccaccaccgagccccac
aaaattccggttaccattctctcccggtgtcagcgccacgacctctcctttgtgggcatt
gatcccctggtggcgcacctggaaaccctgtgcgaaaaagaaaacatccccatcgaaaaa
aagagccttgaactgatcgcccacgaggcgggcggcagcgtccgggacagcctgagcctg
ctggaccaggtgatgagcagcgcccagggaccggtttcccatgaaatggtgctcgaagcc
ctgggcatcatcgaccgggaggtgattttcggcctgtccggggccgtgctggccggcgac
atgacaggtgcgctggacattctggataccgtttacaggggcgggcacgacatcaagcga
ttctacgccgagatgctgggccattttcgagacctgctgatggtcaagctgggggtccgg
gccgagcgcctggcgtccctgcccggctgggccgtggaaaagatgcaggcccagacccgc
gacgtgaccgaactctttttaagccaggccatggccctgatgctggcggaagaggacagg
gtccggttttccagccagccgaaaatcgccgtggagatggtctttgtcaagctgctgcac
accaaaccggtgctgcccattgatacgctgattcaaaaagtggacgccctcagaaaatcc
tttgcccaactggccggcaacggcaatgcacctgccacggcttccaaagacgcggcaccc
gaaagaaacgccgacggtgctgccggtgtttccgcgtcccggccggcccaggccaggccc
gcgcccacggaaaatcaaccgcggccatcttctccgccgccggcttcgccactgccagaa
gaaaccgggccggtcgcaaccggtaccacggacccggtacccctggacaacgcagggacc
tgggaggccattctggccagaatcgacgaacaataccccctgctgggggccaacctgcgc
aacagcaccctggccgccatggagggcggccggctggagatcaaggtatacggttcccag
accaacaaggccatccttgcccgggaacagagcatggaaaacctgaaacaggtgtgttgt
gatttttttaaaaccgatataaaccttgccgtcacctatacgtgcgacacccagccggcg
caaccggacaaacaaaaacccaggaccgcgggtccggacccgctggttgccgaggccctg
aacatttttggtggaactattgtaaacacatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (64)   

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