KEGG   Desulfosporosinus orientis: Desor_4604
Entry
Desor_4604        CDS       T01675                                 
Name
(GenBank) conserved hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dor  Desulfosporosinus orientis
Pathway
dor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Desor_4604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dor03019]
    Desor_4604
Messenger RNA biogenesis [BR:dor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Desor_4604
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2
Other DBs
NCBI-ProteinID: AET70008
UniProt: G7WC34
Position
complement(4797380..4799044)
AA seq 554 aa
MAKEHKLQIIPLGGLGEIGKNMTVIRYDNQMVLIDAGLAFPDDDMLGIDIVIPDYSYLIE
HKEMLLGILLTHGHEDHIGALPYLLRDLEVPVFGTRLTLGIIQSKMKENNLSSIQATVVQ
PRDVIKLGVFRIEFIRVNHSIPDSVAIAIHSPLGTIVATGDFKLDHTPVSGEILDIHKFS
ELGDKGVLCLLSDSTNVERAGFTPSESHVGEMIDEAFRNAKDRVILASFASNVYRLQQAI
TSAVNTNRKVAVVGRSMVNIVGIAEELGYLDIPEGTLIDIDEIIGLPGNQACILTTGSQG
EPMSALTRMANHDHRHVAIQPGDTVIISASPIPGNEKSVAKTVDQLFKLGANVIYESAEG
MHVSGHASQEEQKLMLSMVRPQYFMPVHGEYRMLIKHAQLAEQLGVPRENIFITENGGVV
EFTRHGAALGGKVMSGKVLIDGLGIGDVGNIVLRDRKQLSQDGILIVVMTISRTSGAIVA
GPDVVTRGFVYVRESESMLDEAKQKVRQTMARCRENRVTEWAVFKNQIREALSKHFYEKT
RRRPVILPIIQEVE
NT seq 1665 nt   +upstreamnt  +downstreamnt
ttggcaaaagaacacaaattacaaattatccctttagggggacttggagaaatcgggaaa
aacatgaccgtcattcgttacgataaccaaatggtacttatcgatgcgggacttgctttt
cccgatgatgacatgcttgggattgatattgtcatcccggactacagctatttgattgaa
cacaaagaaatgcttttaggtatattgctcacccatggacatgaagatcatatcggggca
ttgccttatttattgagagatctggaagtaccggtatttgggacgcgtttgaccttagga
attattcagtccaaaatgaaagaaaataatttgagcagtattcaagcgacggttgtacag
ccacgagatgttataaaattaggagtatttcgcattgaatttatccgtgtaaatcatagt
attcccgactccgttgcgatagcgattcattcccccctgggaacgattgtcgccactggg
gactttaaattagaccacaccccggtttctggagaaatattagatattcataaattttcc
gaactgggggacaaaggagtattatgcttactatcagatagtacgaatgtagaaagagct
ggttttaccccctcagaaagtcatgttggagaaatgattgacgaagcatttcgcaatgca
aaagatcgtgtcattttagcaagctttgcgtcaaacgtataccggctacaacaagcgatc
acttccgcagtaaatactaatcgcaaggtagctgtagtgggacgaagtatggtcaatatt
gtgggaattgcagaagaactgggatatctggatattccggaaggaaccttaatcgatatc
gacgaaataatcggcttacccggaaaccaagcttgcatcttaactacaggcagtcaaggg
gaacctatgtcagcattaacccgaatggccaatcacgatcatcgtcatgtggctatccag
cccggtgatactgtgattatttctgccagcccgattcctggtaatgaaaaatccgttgcc
aagacagtggatcagttatttaagctgggggcaaatgtgatttatgaatcggcagaaggg
atgcatgtatccggtcacgctagtcaagaggaacaaaagttaatgttaagtatggttcgc
ccacagtattttatgcctgtccacggtgaatatcggatgcttattaaacatgcacagttg
gccgagcagcttggtgtccccagggagaatatatttatcactgaaaatggcggggttgtt
gagtttacccgtcatggtgcagctttaggcggaaaggttatgtcaggtaaagtcttaatt
gatgggctgggtatcggagatgttggaaatattgttctgcgggatcgcaagcaactttct
caagatgggatattaatcgttgtcatgacgataagccgtaccagcggcgctattgtggcc
gggccggatgtagttactcgagggtttgtatacgttcgtgaatcggagtccatgttagat
gaagctaaacaaaaggtcagacaaacgatggcacgctgccgtgagaatcgcgttacggaa
tgggccgtgtttaagaatcaaatacgagaagctttaagtaagcatttttatgagaagaca
cgtcgaagacctgtgatattgccgattattcaggaggttgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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