KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0118100-01
Entry
Os01t0118100-01   CDS       T02163                                 
Symbol
Os01g0118100
Name
(RAP-DB) Similar to Fructose-bisphosphate aldolase.
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Os01t0118100-01 (Os01g0118100)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os01t0118100-01 (Os01g0118100)
Enzymes [BR:dosa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     Os01t0118100-01 (Os01g0118100)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     Os01t0118100-01 (Os01g0118100)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C dsrm HA2_N DEAD
Other DBs
RAP-DB: Os01t0118100-01
Position
chr01:join(1024187..1024337,1024440..1024570,1025330..1025497,1025578..1025850,1026357..1026551,1026722..1026925,1027012..1027081,1027185..1027333,1027551..1027859,1028169..1028228,1028339..1028491,1028569..1028679,1029243..1029725)
AA seq 818 aa
KVRLEGMKGRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDL
LPRRPELRLVLMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRLTPYN
QIDDYGQEKSWKMQKQALRKRKSQIASVVEDTVQAADLRDYSARTRDSLSCWNPDSIGFN
LIENVLCHICQKERAGAVLVFMTGWDDINALKEQLQANPLLGDPSKVLLLACHGSMASSE
QKLIFDRPEPGVRKIVLATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWIS
KASARQRRGRAGRVQPGECYHLYPQCVYEAFADYQLPELLRTPLQSLCLQIKSLRLGSIS
EFLSRALQSPESLSVENAIEYLKVIGAFDRNEELTILGKHLSMLPVEPKLGKMLIFGAIF
NCLDPILTIVSGLSVRDPFLTPFDKKDLAESAKLQFSCRDYSDHLALVRAYEGWREAERD
RNGYDYCWKNFLSVQTLKAIDSLRRQFLFLLRDTGLVDENMTACNKWSRDENLVRAVICA
GLYPGVSSVVNKEKSISLKTMEDGQVMLYSSSVNGKETKIPFPWLVFNEKVKVNSVFLRD
STAISDSILLLFGGNIKQGGLDGHLKMLGGYLEFFMSRDLASTYLSLKSELDNLIHCKLQ
NPRMDIQTSEELLSAIRLLVTEDPCNGRFVYGRQEQRSKKAKTMFSAAPMSHGGGGNGGD
NAKNQLQTLLTRAGHDNPSYKTKQIKNSLFRSTVEFNGMQFVGQPCANKKLAEKDAAGEA
LNWLTGGAPSDSRDPQDMDHMSMLQKPPRRKRHHHRRG
NT seq 2457 nt   +upstreamnt  +downstreamnt
aaagttcggttggaaggaatgaaaggacgggacacacgccttcttttctgtactactgga
gttctgttgcggagattgctggtggatagaaatttgaaaggtgttacccatgttattgtt
gatgaaatccatgagcgtggcatgaatgaagattttcttcttattgtcctgaaggacctt
cttccacgccggcctgagctaagacttgttttgatgagtgcaacccttaacgctgagtta
ttctcttcatactttggtggagctcccatgatacatatacctggtttcacttatcctgtt
cggagtcgatttctagaagatattctcgaaattactgggcacagattaactccttacaat
caaattgatgactatggtcaagagaaaagttggaagatgcaaaagcaagctctaaggaag
aggaagagccaaattgcttcggttgtagaagatacagttcaagctgctgatttaagggac
tacagtgcacgaactcgtgactcactatcctgttggaatcctgattcgattggttttaac
ttgatagaaaatgtcttatgccatatatgccaaaaggaaagagctggcgcagttcttgta
tttatgactgggtgggatgacatcaatgcactgaaagagcagctgcaagcaaacccattg
cttggagaccctagtaaagttttactgcttgcatgtcatggttcaatggctagctcagag
cagaaactaatatttgatagacctgagcctggtgtaaggaaaattgttcttgcaaccaat
ttggctgaaacaagtattactatcaatgatgtagtttttgtggttgattgtggcaaagca
aaagagacatcttatgatgcattgaacaacactccatgtttgcttccaacctggatctcc
aaggcttctgccagacagagacgaggaagagctggtcgagtccaaccaggggagtgttac
catctatatccacaatgcgtgtatgaagcatttgctgactatcagttgccagaactcctg
agaactcctctgcaatccctctgtttgcaaataaaaagcttgcgccttgggagcatctct
gaatttttatccagagctttgcaatcacctgagtctctatcggtagaaaatgccattgaa
tatctcaaagtcattggagcgtttgatcgtaatgaagagttaacaattctaggaaagcac
ttatccatgcttccagttgagcctaaattggggaagatgctgatttttggtgctattttt
aattgccttgatcccatattaaccattgtttcgggacttagtgtgagagatccattcttg
actccatttgacaagaaggatcttgcagagtctgctaaattgcagttttcatgccgggac
tatagcgatcaccttgcacttgttcgtgcatacgaaggatggagagaggctgaaagagat
cgcaatggctatgactactgctggaaaaattttctatccgtgcaaaccttgaaagccata
gattcccttcggagacaatttctctttcttctcagggatactgggttggttgatgaaaac
atgactgcgtgcaataaatggagccgtgatgaaaatctagttcgggcggtcatttgtgca
ggattatatccaggtgtttcctctgttgtgaacaaggagaaatcaatttctctcaagaca
atggaggatgggcaagtcatgctttactcgagttcagtcaatggaaaagaaaccaagatt
cccttcccctggctggtgttcaatgagaaggtgaaggtgaattctgtttttctccgggac
tcaacggctatatctgattctatactgttactctttggaggcaacataaaacaagggggc
ttggatggacatttgaaaatgcttggaggatatcttgagttcttcatgagtcgtgatctt
gcatcaacttacttgagtctcaagagtgaacttgataatttaatccattgcaagctccaa
aacccgaggatggacatccaaaccagtgaagagcttctgtcagcgattagactgcttgtc
actgaggatccatgcaacggtcgtttcgtatatggtcgacaagagcaaagatcaaagaaa
gcaaagacaatgttctctgcagcccccatgagccatggtggtggtggaaatggaggagac
aatgctaagaaccagctccagacccttctcactagggctgggcatgataacccatcctac
aagacgaagcaaatcaagaacagcctcttcaggtcgaccgtggagttcaatgggatgcag
tttgtagggcagccgtgtgccaacaagaagcttgcggagaaggatgctgcaggagaggca
ctgaactggctgacaggaggagctccctccgactcaagagatccccaagacatggatcac
atgtccatgcttcagaaaccaccacgcaggaagaggcatcatcataggaggggttga

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