KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0234800-01
Entry
Os01t0234800-01   CDS       T02163                                 
Symbol
Os01g0234800
Name
(RAP-DB) Similar to 25.3 kDa vesicle transport protein.
  KO
K08517  vesicle transport protein SEC22
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04130  SNARE interactions in vesicular transport
dosa04145  Phagosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    Os01t0234800-01 (Os01g0234800)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    Os01t0234800-01 (Os01g0234800)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os01t0234800-01 (Os01g0234800)
Membrane trafficking [BR:dosa04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    Os01t0234800-01 (Os01g0234800)
SSDB
Motif
Pfam: Longin
Other DBs
RAP-DB: Os01t0234800-01
Position
chr01:complement(join(7441824..7442011,7441109..7441269,7440941..7441026,7440371..7440376))
AA seq 146 aa
MVKLTMIARVTDDLPLVEGLDDGRDLKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPY
LFHYIIEGRVCYLTMCDCSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYER
NT seq 441 nt   +upstreamnt  +downstreamnt
atggtgaagctgacaatgatagcacgtgttactgatgaccttccgttagtggagggatta
gatgatggtcgggatctgaaggatgctgacttctacaagcagcaagctaaactgttgttc
aagaacttatcgaaagggcaacatgaagcatcaaggatgtcaattgagactgggccatac
cttttccattacatcatcgagggccgtgtgtgctatttgacaatgtgtgactgctcttat
ccgaagaaacttgctttccagtacttagaagatctcaaaaatgaatttgagagggtcaat
ggcaaccaaattgaaactgctgcaagaccatatgcttttattaagtttgacactttcata
cagaagacgaagaagttgtatttggataccagaacccaaaggaacctggccaagttgaat
gatgagctttatgagaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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