KEGG T02163: Os01t0550100-01

Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0550100-01

Entry

Os01t0550100-01 CDS T02163

Gene name

Os01g0550100

Definition

Similar to Ubiquitin-specific protease 6.

Orthology

K11843

ubiquitin carboxyl-terminal hydrolase 14 [EC:3.1.2.15]

Organism

dosa Oryza sativa japonica (Japanese rice) (RAPDB)

Class

SSDB

Motif

Pfam:

UCH UCH_1 ubiquitin Peptidase_C98

Other DBs

RAP-DB:

Os01t0550100-01

Position

chr01:complement(join(20589445..20589454,20587459..20587604,20587319..20587354,20587099..20587206,20586105..20586205,20585898..20586024,20584854..20584913,20584702..20584766,20584480..20584533,20583898..20584006,20583634..20583723,20583486..20583554,20582879..20582959,20582723..20582797,20582525..20582573,20582207..20582326,20582052..20582126,20581921..20581970))

AA seq 474 aa
MPTVSVKWQKETFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDADWSTL
GVKDGQKLMMIGTADEIVKAPEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNSTLQ
CLHSVPELKSALLSYSDNVRGNGVDQASHNLTVATRNTFGELDQSVRPVAPLLFLQTLRK
KYPQFAQQQNNVYMQQDAEECWTQLVYTLSQTLTSETSEPPAGQMKELFGIDLVSRVHCA
ESGEESLERESVYSLKCHISHDVNHLHEGLKHGLKSELEKASPSLGRTALYTRESRINEL
PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDELKQKLQAPRQMLRDAENA
KFGLKAQGKASSSKENEGSSSNAGESSSMDIDKADSSVPKKHLTGIYDLIAVLTHKGRSA
DSGHYVGWVKQDDGKWIEFDDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI

NT seq 1425 nt +upstreamnt +downstreamnt
atgccgaccgtaagcgtgaaatggcagaaggagaccttcccaggcatagagatagacacc
agccagccgcctgttgtctttaagacccagctatacactctgactggtgtaccacctgaa
aggcaaaaaattatggtgaagggtggaatattgaaggatgatgcagattggtctactttg
ggagtgaaagatggtcaaaaattgatgatgataggtacagctgatgagattgtgaaagct
ccagagaaaggaccagtatttgtagaggatctaccagaagaagagcaagtggttgcactg
ggacacagtgctggtctttataacttggggaatacatgttacatgaattccactttgcag
tgcctgcattctgttccagagctgaagtcagctttattgagttattcagataatgtgagg
ggtaatggtgttgaccaagcctcccataatttgactgttgcaactcgtaatactttcgga
gagcttgatcaaagtgttcggcctgttgcacctctactcttcttacagacgctgcgtaaa
aagtatccccagtttgcgcaacaacaaaataatgtttatatgcaacaggatgcagaagaa
tgctggacccaattggtgtatacactttctcaaactcttacatcagaaacaagtgaacct
cctgctggtcaaatgaaggaactttttgggattgatctcgtgagcagggtccattgtgca
gaaagtggtgaagagagtttagagagagaatcagtttattctttgaagtgtcatatatct
catgatgtaaaccaccttcatgaaggacttaagcatggtttgaagtcagaacttgagaag
gcttcaccttcactgggtcgcactgctctttatacaagagagtcaagaataaatgagttg
cctaggtacttgactgtgcagtttgttcgtttcttttggaaaagggaatcaaaccagaag
gcaaagattttacggaaagttgattacccgctggaactggatgtttatgacttttgctca
gatgaactgaaacaaaaactccaagctccccgacagatgctgagagatgcagaaaatgct
aagtttggattaaaagcacaaggaaaggccagcagctcaaaagaaaatgagggttcatca
agcaatgctggggaatcatccagcatggatattgacaaagccgattcttctgtgccaaag
aaacatttgactggcatctatgatttaattgctgttttgacgcacaaagggagaagtgca
gactcaggccattatgttggctgggttaagcaagatgacgggaaatggattgaatttgat
gatgacaaccctagcatacgcaaggaggaagagattttaaagttatctggtggaggcgac
tggcacatggcttacatttgcctgtacaaagctcgtgttatctga

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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