KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0623600-01
Entry
Os01t0623600-01   CDS       T02163                                 
Symbol
Os01g0623600
Name
(RAP-DB) Glycoside hydrolase, family 28 protein.
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00040  Pentose and glucuronate interconversions
dosa01100  Metabolic pathways
Module
dosa_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    Os01t0623600-01 (Os01g0623600)
Enzymes [BR:dosa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     Os01t0623600-01 (Os01g0623600)
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix U83
Other DBs
RAP-DB: Os01t0623600-01
Position
chr01:complement(join(24901309..24901812,24900663..24901193,24899843..24900064))
AA seq 418 aa
MSVASSDPISDNLVVFSRMARCSVSRVVLLLLCCMHLSAAAAGAAVYNVESYDARPDGRT
DASRALASAWSAACRSPEPATVYVPDGEFFVSHSAFAGPCSGGRMTVQIDGTLVAPSGYT
GSASSGGEWIVFDHVDGLTVSGGTLDGRGESLWACKAAGHGGCPDGATSMKVLNSRDVVI
SGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSPNTDGIHVQSSSAVTITGASIQTGDD
CISVGPGTSNLRVEHVSCGPGHGISIGSLGKESEEGGVENVTVSGAAFVGTENGLRIKTW
GRAARSGAYVRGVVFEHALMRDVSNPIIIDQSYCPNDGGQGCPHQSSDVQISGVTYTDIQ
GSSASQVAVKFDCSASKPCSGLGLQDIKLTFDGGKPAEATCQHADGTASGVLMPPSCL
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtcagtagctagcagcgatccgataagtgataatttagtggtgttttcacgcatggct
cggtgcagcgtctcccgtgttgtcttgttgctcttgtgttgcatgcatctgtcggctgca
gctgcaggagcagcagtgtacaacgtcgagagttacgacgcgagacctgacggccggacg
gacgcgtccagggcattggcgtccgcctggtccgccgcatgccggtcgccggagccggcc
accgtgtacgtgccagacggcgagttctttgtcagccactcggccttcgctggcccgtgt
tccggcggcaggatgacggtccagatcgacggcacgctggtcgcaccgtccggttacacc
ggcagtgccagctctggcggggagtggattgtgttcgaccacgtcgacggcctcaccgtg
tccggcggcaccctcgacggccgcggtgagtcgctgtgggcgtgcaaggcggccggccac
ggcggctgcccggacggcgcaacatcgatgaaggtgctgaactcgagggacgtggtgata
agcggggtcaagtcggtgaacagcgagctgtaccacgtcgtgatcgacgggtgcgagggc
gtggcggtgcaggacgcccggatcgtggcgcccgggagcagccccaacacggacggcatc
cacgtgcagtcgtcgtccgcggtcaccatcaccggcgccagcatccagaccggcgacgac
tgcatctccgtcggccccggcacctccaacctccgcgtcgagcacgtcagctgcggcccc
ggccacggcataagcatcgggagcctggggaaggagagcgaggagggcggggtggagaac
gtgacggtgagcggcgcggcgttcgtgggcacggagaacgggctgcggatcaagacgtgg
gggcgggcggcgcgctcgggggcgtacgtgcgcggcgtcgtcttcgagcacgcgctcatg
cgcgacgtgagcaaccccatcatcatcgaccagagctactgccccaacgacggcggccaa
ggctgcccccatcagagctccgacgtgcagatcagcggggtgacgtacaccgacatccag
ggttcgtcggcgtcgcaggtggcggtcaagttcgactgcagcgcgagcaaaccctgcagc
gggctcggcctgcaggacatcaagctcacgttcgacggcggcaagccggcggaggcgacc
tgccaacacgccgacggcacggcctccggtgtcctcatgcctcccagttgcctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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