KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0202250-01Help
Entry
Os02t0202250-01   CDS       T02163                                 

Gene name
Os02g0202250
Definition
Hypothetical conserved gene.
Orthology
K14310  
nuclear pore complex protein Nup205
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
RNA transport
Class
Genetic Information Processing; Translation; RNA transport [PATH:dosa03013]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
Position
chr02:complement(join(5724412..5724563,5724224..5724343,5723837..5723957,5721966..5722163,5721759..5721877,5721486..5721636,5721288..5721400,5721135..5721216,5720966..5721052,5720801..5720878,5720544..5720726,5719562..5719654,5719383..5719496,5719142..5719300,5719001..5719056,5718842..5718914,5718551..5718741,5718313..5718445,5718165..5718242,5717545..5717709,5716650..5716820,5716438..5716572,5713889..5714032,5713694..5713816,5713504..5713596,5711618..5711743,5711321..5711421,5710542..5710661,5710374..5710449,5710002..5710085))
AA seq 1212 aa AA seqDB search
MEECVWQIYDMRFELNEVEAMRESYPSTISFLNLVNALIAEERNISDKGRRFMGIFKFVY
EDVFGPFPQRAYADPREKWELAVACLEHFRMVLSMYDIKDDDIYAAVNASGPSTTSHASI
DRQLPVLELLKDFMSGKVAFRNIMNIVSVGVDTLINERTTQTYGILLEKTVHLSFEIFIL
VMERDLVLADVFRPLYQPLDVVLAQNHRHIIALLEFVRYDYLPQIQQCSIKIMGILSSRI
VGLVQLLLKADVAKSVIEDYAACLEFRFDDFQAIENTKDDVGVLILQLLIDNICRPAPNI
THLLLRFDVNGSIERTVLKPKSHYSCLKTILDNLEKVTKPDINALLHEFGFQLLYELCLD
PLTCGPVMDLLSTTKYQFFSKHVGTIGVSPLPRRNNNQSLRISMLHERAWLLKMLALALH
VSDISSSLYRESCLAILCHTFGHCAENLRSANLLQSPGSSNLAMNGNKVLDLLEVVQFRC
PDTSIKYPQMLSNLRLESKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQMSQ
LLNPQLSESEKSELKESFHQMLKWAWRYNKNLEEQAAQLHMLTGWSQIVEIAVSRRMSLL
EDRSHLLFELLDASLSATTSPDCSVKMAYILTNVALTCMAKLRDERFICPTGADSDAVTC
LDIISAKQLSNAACTSLLFKLTMAILRNESSETLRRRQYALLLSYFQYCRSTLDSDVPPP
VLRFLLLEEQEGDDDELGLQKVLKEQNELARSNFSIIRKEAQAVIDLVAKDAIHGSEAGK
AISFYVLDSLISIDHDKYFLNQIQSRGILRSCLSDVNNYLSKEASFSSESSQRFCTIDAQ
LSLLLRISHHYGKHGSQILLSMGALHNLSSCNLMGSQKKANSRLNSNVVKERAGEIDKRR
SLTAPILRIVTSFTSLVDSADFLEVKNKIVRELVDFAKQHQPVFNIILRESISGANIFNL
ERLNMVVSILGKVWAYEENDECSFVQDLFSMMQFLFSLDIGSLNFMQSSNMIENQKSELI
VFALCFSLISYLYVLATKKDMRFQISYDDTTEGQQQPTLQLISDLLNSITVAMERVAEEK
YMLLNKIRDLNELSRKEVDDIIKLCMKQDCISPNDNIRKRRFIAMIELCCMAGNRGQLIT
LLLQIAECAVTILLVHFQDESCAKDISSFSDELLPILERLEHFTEDKVGRSLKLFHRSVT
TLKEMTIRSMSL
NT seq 3639 nt NT seq  +upstreamnt  +downstreamnt
atggaagaatgtgtttggcagatctatgacatgaggtttgagttgaatgaagttgaagca
atgagggagagttatccatccacaatatcatttctcaacttagtcaatgctctaattgca
gaagaaagaaacataagtgacaagggccggaggtttatgggtatatttaagtttgtttac
gaagatgtatttgggcctttccctcaaagagcctatgccgatcctcgggagaagtgggaa
ctggcagttgcttgcttggagcacttccgcatggttttaagcatgtatgacatcaaggat
gatgatatttatgctgctgttaacgcatctggaccttcaacaacatctcatgcctcaatc
gacagacagctccctgtgcttgagctactcaaagatttcatgagtgggaaagttgctttc
cggaatattatgaacatcgtatcagtgggtgtggacactcttattaatgagcgaactacc
caaacttatgggattcttctggagaaaactgtccatctatcatttgaaatatttattctt
gtgatggagagagatctggtgcttgctgatgttttccgtccactctaccagccgttggat
gttgtgttagctcagaatcatagacatattatagctttactggagtttgtacgatatgat
tatcttcctcagattcaacagtgctctataaaaattatgggaattctgagttctagaata
gttggtcttgtccagttgcttctgaaagcagatgttgctaaatcggtaattgaggattat
gctgcttgcttggagttccgctttgatgatttccaggccatagagaacacaaaagatgac
gttggtgtcctaatactacagctacttatcgacaatatttgtcgtccagctcccaacatt
acacatctactcctaagattcgatgtcaatggatccatagaacggacagttttaaaacca
aagtcacactacagttgtttaaagacaattcttgacaatcttgaaaaggtgacaaagcca
gatataaatgctttactgcatgaattcggttttcagcttctctacgagttatgccttgac
cctttaacttgtgggcctgtcatggatctcctgagcacaacaaaataccagttcttttct
aagcatgttggaaccattggtgtgtcaccacttccgagaaggaacaacaatcaatctctt
cgtattagcatgctccatgagagggcatggttgctaaagatgctagcattggcattgcat
gtatctgatatatcatcgtccttataccgggagtcctgtttggctattctatgtcatact
tttggccattgtgctgagaacttaaggagtgcaaacctgttacaatctcctggcagtagc
aatttagcaatgaatggaaacaaggttttggatttgcttgaagttgtccagttcagatgt
ccggacacttccattaaatacccccagatgctttctaacctgagacttgaatcaaagatt
gaagagatcctaaggaattccgcgacatctgaatttggtggtgtatattattattcagag
cgaggcgatagattgattgatcttgatgcatttcatgaaaaacttctccagatgtctcag
ttattgaacccacaattaagtgaatctgagaaaagcgagctaaaagaatcattccatcag
atgctgaaatgggcctggagatataacaaaaatcttgaagaacaagcagcccagcttcac
atgttgactggctggtctcaaattgttgaaatagcagtatctagaaggatgtcattactt
gaagatcgttctcatttattgtttgagctccttgacgcttcattaagtgccacaacatct
ccagattgttcagtgaaaatggcatatattttaaccaatgtggcattgacttgtatggcg
aaactgcgggatgaaagattcatatgcccaaccggtgccgattctgatgcagttacttgc
cttgacatcatttcagcaaagcagttgtcaaatgcagcctgcacttcattattgttcaaa
ctcacgatggcaatactaagaaatgaatcttctgagaccttgagaagacgccaatatgca
ttactgttaagttattttcagtactgccgtagcacccttgactctgatgtccctccacca
gttcttcggttcttactacttgaagaacaagagggagatgatgatgaacttggtcttcaa
aaggttctcaaggaacaaaatgaattagcacgcagcaacttctctatcataaggaaggaa
gctcaagcagttattgatttggttgccaaggatgcgatccatggaagtgaagcagggaaa
gcaatttcattctacgttcttgattcactgattagtattgaccatgacaagtattttttg
aaccaaattcagagtcgaggaattctcagatcatgtctaagtgatgttaacaactacttg
tctaaggaagcatcattctcatcagagtcttcacagcgattttgcactattgatgctcaa
ttgtcattacttctgagaatcagtcaccactatgggaaacatggctcccagattctgttg
tccatgggtgctctacataatctttcgtcgtgcaacctgatgggttcgcagaaaaaggca
aattcaaggctcaactccaatgtagtgaaagagcgagctggagaaattgacaagaggaga
tcacttactgcaccgatacttagaatagtcacatctttcacctcacttgtggactccgct
gattttcttgaggtgaagaacaaaattgtccgggagttagtagacttcgccaagcagcat
cagcctgtttttaatatcattttaagagagagtatatctggagctaatatattcaacttg
gagcggcttaatatggtggtctctattcttggcaaggtatgggcatatgaggaaaatgat
gaatgcagctttgtccaagatctattttccatgatgcaatttcttttcagtcttgatatt
gggtctctcaactttatgcaatcatcaaacatgattgagaatcagaagtcagaattgata
gtgtttgccttgtgcttcagccttatctcctacctatatgttctggctacaaagaaggat
atgcggtttcaaatttcgtatgatgatactactgaaggtcagcagcaaccaacactacaa
ctgatttcagatcttctaaactcaataacagttgctatggaaagagtagctgaagaaaaa
tatatgttgctaaataagattcgtgacttaaatgagttatctaggaaggaggttgatgat
ataataaaattatgcatgaaacaagattgtatctctcccaacgataacatccgtaaaagg
aggttcattgcaatgatagaattgtgttgcatggccggcaaccgaggccagctcataacc
cttctactccaaatcgcagaatgcgctgtcactattctccttgttcattttcaagacgag
tcttgtgcaaaagatatttcttcattttctgatgagttgcttcctatcctggagaggcta
gagcattttacggaggacaaggtcgggcgtagcctcaagctatttcaccgatctgtaacc
actctaaaagagatgaccatcagaagcatgtcattgtga

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