KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0295700-01
Entry
Os02t0295700-01   CDS       T02163                                 
Symbol
Os02g0295700
Name
(RAP-DB) Aldehyde dehydrogenase, conserved site domain containing protein.
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Os02t0295700-01 (Os02g0295700)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os02t0295700-01 (Os02g0295700)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Os02t0295700-01 (Os02g0295700)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     Os02t0295700-01 (Os02g0295700)
SSDB
Motif
Pfam: PAT1
Other DBs
RAP-DB: Os02t0295700-01
Position
chr02:complement(join(11300026..11300059,11299532..11299692,11296171..11296227,11295874..11295943,11293412..11295582))
AA seq 830 aa
MAAQPSSSASTGATKFDASQYAFFGNNAVEEVELGGLEDDDGVDAGFVGPGDEEYPSAYG
RDMFEDEGGGSFTGVDDLAGAFSKLTRSINEPTQSGIISHGGSISRQSSTPDWAQDSYWP
TQPIFGAEQGLDNESRWSQPPHLARFADSRLHRTSSSPQQDAQYNPNEHILGAMPYLLHR
TSSYPQQEPQYNHTEPIPVPKSSFISYPPSGAVSHSSPGQPHHMNMPSPPTSFQMPVSAQ
NELHHPQFPRGGMPPGPLGRNMAHLDSAGLSTNNLQQNALNSGPIRPNGAMLTPGLVQHN
LQRPNGLVPPQMLSRRPQHGMAPIQHSPPQFSQFHAQMLGPRHPPPQGRQMYNPQHSSQM
MSGFDANLAMPDLSDPRARAMLHHGVHGQHYLPQGFELASMRMDNGWPRFRSKYMSTAEI
ENIARMQQAATQINDPYIDDYYHQACLAKKSAGGQLKHHFCPTLIRDPSSCARSKDEPHA
YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC
LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPLTPSNNGPLSPNDDLV
FLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLRFIFGNLPSDSSAVETTTKLA
TAVSTCVVRLELSGLSACLAAIVCSSLQPPLRPLGHAAGDGASFIIKSVLDRATELLTDQ
HVASTYSMQNRALWQASFDAFFGLLTEYCMSKFDSVIHALQTQPAVAAVISREMPVELLR
ASLPHTNEYQRKQLLSFSQRTVPVNNHSSHGSNNGPMTSESIPSSESRKI
NT seq 2493 nt   +upstreamnt  +downstreamnt
atggcggcgcagccttcttcgtcggcgtcgacgggcgctaccaagtttgatgcatcgcag
tatgctttctttgggaacaacgcggtggaagaggttgagctaggtggattggaggatgat
gatggtgtcgatgctggttttgttggccctggtgatgaagaatacccttctgcttatgga
agggatatgtttgaggatgaaggtggaggttcatttactggtgttgatgatcttgctgga
gcattctcaaagttgaccagaagcatcaatgaaccaacacaatcgggcataattagtcat
gggggttcaatttctagacaaagttctactccggattgggcacaagattcatattggcct
acgcagcctatatttggagctgaacaagggctggataatgaaagccggtggtctcaacca
ccccatttagcccgctttgctgattctagactgcacagaacatcctcatcgccgcagcaa
gatgctcaatacaatcctaatgaacatattcttggagcaatgccatatctgttgcataga
acttcatcatacccacaacaagagcctcaatacaatcacacagaaccaattccggtacct
aaatcatcattcatttcgtaccctccatctggtgcagtatcccattcttcaccaggtcaa
ccacatcacatgaacatgccatctcctcccacttcattccaaatgcctgtatctgcacaa
aatgagttacaccatccccagtttcctcgtggtggtatgcctccagggccacttggtcgg
aacatggctcatttggattcagcaggtttatcaactaataatttgcaacagaatgctcta
aacagtgggccaattcgtccaaatggtgccatgcttacaccaggtttggtgcagcacaat
ctgcagcgtccaaatggattggtcccacctcaaatgctgtcacgccgtccacaacatgga
atggccccaattcaacactctccgccacaattctcacagttccatgctcagatgcttggt
cctcggcatcctccaccacaaggtcgtcagatgtacaatcctcagcattcatcacaaatg
atgagtggatttgatgcaaatttggcaatgcctgacttgagtgatccgagagcaagagca
atgctgcaccatggagtgcatggccagcattatctcccccaaggttttgagcttgccagt
atgaggatggataatgggtggccgcggttcagatccaagtacatgtccacggctgaaatt
gagaacattgcaaggatgcagcaagctgctactcagatcaatgatccgtacattgatgat
tactatcatcaagcctgtttagctaaaaagtcagcaggaggtcaactcaagcaccacttc
tgtccgaccttgattagagatccatcatcctgtgcacggagtaaagatgagccacatgca
tatctccaggttgatgctcttggaaggttaccattttcttccatccgcaggcctcgtccg
ctcctcgatgttgaacaaacctctgaatcaagtgatgacgttactgaaaaatctgcttca
aaaacacttgaccaagaaccaatgctggctgctaggatcacaattgaagatggcctttgc
ctactgcttgatgtagatgatattgatcgcttgctgcaatttagtcagcagcaagatggt
ggcttgcaactgagaaacaggagacaggccctccttgagcagctggcagaatcgctgcaa
ctagttgatccacttacacctagtaacaatggacctctctcaccaaatgatgatctggtg
tttctccgaatagtctctcttccgaagggccgcaagctactttctcgttaccttgaactt
gttagttctggcagtgagcttgctagaattgcttgcatggcagtcttccggcatctaaga
ttcatatttggaaatttgccatctgatagtagtgctgttgagacaacgacaaaacttgct
actgctgtatcaacctgtgttgttcggttggagttgagtggactaagtgcttgccttgca
gctattgtgtgttcttcgttgcaaccccctctgcgaccccttggacatgctgcaggtgat
ggggcttctttcatcataaagtctgtactggacagagcaacagagcttctcactgatcag
catgtggcctctacctacagcatgcaaaacagagctctatggcaagcatcatttgatgcc
ttctttgggctgcttacagagtattgcatgagtaaattcgatagtgtgattcatgcattg
caaacacaacctgctgtggcagcagttataagcagggaaatgccagttgaattgttgcgt
gccagccttcctcacacaaatgagtatcagcgaaaacagttgctcagtttttctcagcgc
acggtgcctgttaacaaccatagttctcatgggtccaataatggacctatgacatcagaa
tctatcccaagttcagaaagccggaaaatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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