KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0596100-01
Entry
Os02t0596100-01   CDS       T02163                                 
Symbol
Os02g0596100
Name
(RAP-DB) GLE1-like domain containing protein.
  KO
K18723  nucleoporin GLE1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013  Nucleocytoplasmic transport
dosa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Os02t0596100-01 (Os02g0596100)
   03015 mRNA surveillance pathway
    Os02t0596100-01 (Os02g0596100)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os02t0596100-01 (Os02g0596100)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Os02t0596100-01 (Os02g0596100)
SSDB
Motif
Pfam: GLE1 Borrelia_P83
Other DBs
RAP-DB: Os02t0596100-01
Position
chr02:complement(join(23139948..23140015,23139708..23139854,23139443..23139598,23139185..23139308,23138407..23138555,23137193..23137364,23136697..23136883,23135876..23135970,23135654..23135724,23135342..23135423,23134616..23134711,23133798..23133881,23133470..23133598,23132810..23132932,23132496..23132717))
AA seq 634 aa
GVLLRRRGSNPLRGGPRRSTAAMGFARVELRCPRALDPRPSWTLGDVLTELDALEATRRT
AQPTPLKQPPEWASSGSVREKAFVMRVEEEDDTDEDDYDSDGESRALVAKATGARFSCND
LESSDAEESEDEMDGRIAPYHLMEKRSLEKSILLELEREHHLKVQEEVRSKLSALEVCHQ
SEIQRTVSAFARLQKYAESRKEIDRRLDVHFQRKIAEVLDKHLSMVQRDHEQKSQIVERR
IRDDAALEEAKRKEQAMKDEKIRQERAKQEAEARQKAAAKLAVEAQKAAAEAAAKEAAEA
QKAAAEVSKSSQNSQNNVAGTMRANKSEIKSELPGIKVFADHSALEAELRRRALLDQVPA
NIHSSKEFSRYDRQIAKSIGKLMPTTDSVKARAGELIKALDGQDCPRPIACRIFANKIIS
IVKSRNTKDKTFGNLAFACGYVMLLVTSQVPDAMDYLLAEFHRVCMYTVPKHLHALNAQV
RNRDYYRLIGYQEENGQLESTESYLTYVAAYVKLYAAMIQTEIRGVRHPHGLAEGWKWLA
MFLNTLPATTATACALHAFLKVAGFALHKKYGSQFMKLLDVILRCFLPALKEQGSRIQAE
AASNLQNYLTDKVYLEEPEGQYLAQQLLSKELFT
NT seq 1905 nt   +upstreamnt  +downstreamnt
ggggttttgctgcgccggcgcggctccaatccgctccggggcggacctcgccggtcgacg
gccgccatgggcttcgcgcgcgtggagctgcggtgccctagggccctcgacccccgcccg
agctggaccctcggcgacgtcctcaccgagctcgacgcgctcgaggccactcgccgcacc
gcgcagcccacgcccctcaagcagccgccggagtgggctagcagtggcagcgtgagggag
aaggcctttgtgatgcgggttgaagaggaagatgacacggatgaggacgattacgacagt
gatggggagtcccgggctcttgtggccaaggccactggagcaaggttctcatgcaatgat
cttgaatccagtgatgctgaagaatcagaggatgaaatggatggcaggattgcaccatat
cacctgatggagaaacggagcctagagaagagcattctgcttgagctggaacgtgagcat
catctgaaagttcaagaggaagtcagaagtaaactatctgcattggaggtatgccaccaa
agtgaaatccagcgaacagtttctgcatttgctcgactacagaaatacgcagaatcaaga
aaagagatagacagaaggctagatgtccacttccagagaaaaattgcagaagtacttgat
aaacatttgtctatggtccaaagggatcatgaacagaaatcgcaaattgtggaacgtaga
ataagagatgatgctgctcttgaagaagctaaaagaaaggagcaagccatgaaggacgaa
aaaataaggcaggaaagagccaaacaagaagcagaggccagacagaaggcagctgcaaag
ttagcagtggaagcacagaaagcagcagctgaggctgctgcaaaggaagcagcagaagct
cagaaagcagcagctgaggtttccaaatccagccaaaattctcagaacaacgttgcagga
acaatgagggcaaacaagagtgaaattaaatctgaattaccagggatcaaagtctttgct
gatcattctgcactggaagcagaattgcggaggcgtgcattacttgatcaagtgccagcg
aacattcattccagcaaggagttcagcagatatgaccgacaaattgcaaaatctattggt
aaacttatgccgactactgacagtgtaaaagcaagggctggtgagcttattaaagctttg
gatggacaggattgcccacgtccaattgcttgccgtatatttgcaaacaagattatttca
atcgtcaagagtagaaatacaaaggacaaaacatttggaaatttggcctttgcttgtgga
tatgtcatgcttctagtcaccagccaggtaccagatgcaatggattatcttctagctgag
ttccacagagtttgcatgtacacagttccaaagcatctgcatgctttaaacgcacaagta
cggaatagagattattacagactgattggctaccaggaagaaaatggacaactcgagagc
actgaaagttatttgacatatgttgccgcatacgtcaagctgtatgctgcaatgattcag
accgaaattaggggcgtgcggcatccacatggcttagctgaggggtggaaatggcttgcc
atgttccttaatactctcccggccaccacagcaactgcttgtgcccttcatgctttcctc
aaggttgctggttttgcacttcacaagaaatacggatcacagttcatgaaacttctagat
gtaatattgcggtgcttcttacccgctttgaaggaacaaggctcacgaattcaggctgag
gctgcaagtaatctacagaattatctgactgacaaggtttaccttgaggaaccagaaggc
cagtaccttgcgcaacagcttctatctaaagagttgttcacgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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