KEGG T02163: Os02t0633400-01

Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0633400-01

Entry

Os02t0633400-01 CDS T02163

Gene name

Os02g0633400

Definition

Similar to 61 kDa protein homolog.

Orthology

K10739

replication factor A2

Organism

dosa Oryza sativa japonica (Japanese rice) (RAPDB)

Pathway

dosa03030	DNA replication
dosa03420	Nucleotide excision repair
dosa03430	Mismatch repair
dosa03440	Homologous recombination

Module

dosa_M00288

RPA complex

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:dosa03030]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dosa03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:dosa03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:dosa03440]

SSDB

Motif

Pfam:

RPA_C tRNA_anti-codon Inhibitor_I24 SnoaL_4 GIDE tRNA_anti_2

Other DBs

RAP-DB:

Os02t0633400-01

UniProt:

B8AFS5

Position

chr02:complement(join(25408095..25408247,25407876..25407986,25407354..25407451,25407228..25407269,25407064..25407141,25406023..25406101,25405822..25405914,25405650..25405738,25404922..25404990,25404767..25404851))

AA seq 298 aa
MYGVGVGGGGGGNYDGGGGNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLP
LTVKQIMDASQTNDDKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNR
WENDSTDTKEMADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVH
LELTRPKSQVNANTATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLN
VFHDPAVMNDDHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG

NT seq 897 nt +upstreamnt +downstreamnt
atgtacggcgtcggcgtcggcggcggcggcggcgggaactacgatggcgggggagggaac
gccagctccctcttcggcggcggcggattcatgccctcgcaggcgaccaacgccgcggag
gggaccagcggcggcggcggcggcttccccaagagtcggaacgcccaggcgctgctcccg
ctcaccgtgaagcagatcatggacgcgtcccagaccaacgacgacaagtcgaattttgct
gtcaatggcatggaggtgtccacggttaggcttgtaggacgcatgttaaataagcttgat
cgggttacggatgtatcattcactcttgatgatggtacaggcagggtacctgtgaatcgc
tgggaaaacgatagcactgatactaaggagatggctgacattcagaatggtgactatgtt
attgtcaatggtggtctaaaaggttttcaagggaagcgtcaggtggttgcttactctgtg
aggcgtataaccaacttcaatgatgtaacacatcactttcttcactgcgttcatgtgcac
ttggagcttaccaggccgaagtcccaagtaaatgctaatacagcaacaggaactcctaac
caaactatgcctagggatagcatggcgtataaccaaagtccacttactaatcaggcctca
acattttctgcaccacaaaatactggtactggaacaaatatgatcgacttggtcttgaat
gtttttcatgacccagcagttatgaatgatgaccatggagtaggcgtagattatgtgagc
cgtcgtcttaatctaccagaggaaacagtcgggaaaatcattatagaccaagttgatctg
ggacatttgtatgccactatcgatgaccaccattacaagtccacaatgaatggttga

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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