KEGG T02163: Os03t0219400-01

Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0219400-01

Entry

Os03t0219400-01 CDS T02163

Gene name

Os03g0219400

Definition

Glycoside hydrolase, family 20 protein.

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

dosa Oryza sativa japonica (Japanese rice) (RAPDB)

Pathway

dosa00511	Other glycan degradation
dosa00520	Amino sugar and nucleotide sugar metabolism
dosa00531	Glycosaminoglycan degradation
dosa00603	Glycosphingolipid biosynthesis - globo series
dosa00604	Glycosphingolipid biosynthesis - ganglio series
dosa01100	Metabolic pathways
dosa01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:dosa00520]
Metabolism; Glycan biosynthesis and metabolism; Glycosaminoglycan degradation [PATH:dosa00531]
Metabolism; Glycan biosynthesis and metabolism; Glycosphingolipid biosynthesis - globo series [PATH:dosa00603]
Metabolism; Glycan biosynthesis and metabolism; Glycosphingolipid biosynthesis - ganglio series [PATH:dosa00604]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:dosa00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glycohydro_20b2 Glyco_hydro_20b

Other DBs

RAP-DB:

Os03t0219400-01

UniProt:

B4FYZ2

Position

chr03:complement(join(6281802..6282654,6280732..6281696))

AA seq 605 aa
MAALPAYLLLLLLILVILRPAAAPGAASQPPTSEPHLPPPLLAQKVQVWPKPTSISWPSA
VYAPLSPSFSVRAVLSHPSLRQAVAFYTRLIRAERHAPLVPPANYTLSRVPVRTLTLSVS
DPDVPLGPAVDESYTLSVLPDSGSADISAATPWGAIRGLETFSQLAWAGGGAASGGQPIV
PSGIEISDRPHFTHRGILLDTARNFYPVRDILHTLRAMAFNKLNVFHWHITDAQSFPIVL
PTVPNLANSGSYSPTMRYTENDVRHIVSFAASFGIRVIPEIDMPGHTGSWAGAYPEIVTC
ANRFWAPHAEPALAAEPGTGQLNPLNPKTYRVAQDVLRDMVALFPDPYLHGGADEVNTAC
WEDDPVVRRFLAEGGTHDHLLELFINATRPFVAQELNRTVVYWEDVLLGPKVTVGPTILP
RETTILQTWNDGPENTKRVVAAGYRAIVSSASYYYLDCGHGGWVGNDSRYDKQEKEREGT
PLFNDPGGTGGSWCAPFKTWQRVYDYDILHGLTDDEAQLVLGGEVALWSEQSDETVLDAR
LWPRAAAAAETLWSGNKGSNGKKRYANATDRLNDWRHRMVERGIRAEPIQPLWCSLHPGM
CNLSQ

NT seq 1818 nt +upstreamnt +downstreamnt
atggcggcattgccggcctatctcctcctcctcctcctcatcctggtgatcctccgacca
gcggctgcgcccggcgccgcttcgcagccgcctacctcggagcctcacctcccgccgccg
ctgcttgctcagaaggtgcaggtgtggcccaagccgacgtccatctcgtggccgtccgcg
gtgtacgcgccgctctcgccgtcgttcagcgtccgcgcggtgctgtcccacccgtcgctc
cgccaggcggtagccttctacacccgcctcatccgcgccgagcgccacgcgccgctggtt
ccccccgccaactacaccctctcccgcgtccccgtccgcaccctcacgctctccgtctcc
gaccccgacgtcccgctcggccccgccgtcgacgagtcctacacgctctccgtgctcccg
gactccggatcggccgatatctccgccgccacgccatggggcgccatccgcgggctcgag
accttctcccagctcgcctgggccggcggcggcgccgcctccggtggccagccgatcgtc
cccagcggcatcgagatctccgaccgcccacacttcacccaccgcggcatcctcctcgac
accgccaggaatttctacccggtccgcgacatcctccacaccctccgcgccatggccttc
aacaagctcaatgtcttccactggcacatcaccgacgcccagtccttccccatcgtcctc
cctaccgtccccaacctcgccaactccggctcctactcccccaccatgcgctacaccgag
aacgacgtccggcacatcgtcagcttcgccgcctccttcggcatccgcgtcatccccgag
atcgacatgcccgggcacacgggttcgtgggcgggagcgtacccggagatcgtcacctgc
gcgaacaggttctgggcgccgcacgcggagccggcgctggcggcggagcccggcacgggg
cagctgaacccgctcaaccccaagacgtaccgcgtggcgcaggacgtgctgcgcgacatg
gtggccctgttcccggacccgtacctccacggcggcgccgacgaggtgaacacggcgtgc
tgggaggacgacccggtggtgcgccggttcctcgccgagggcggcacgcacgaccacctc
ctggagctgttcatcaacgcgacgcgcccgttcgtggcgcaggagctgaaccgcacggtg
gtctactgggaggacgtcctcctcgggcccaaggtcaccgtcggccccacgattctgccc
agggagaccaccatactgcagacgtggaacgacgggccggagaacacgaagcgcgtcgtc
gccgcgggctaccgcgccatcgtgtcgtcggcgtcgtactactacctggactgcggccac
ggcgggtgggtgggcaacgacagccggtacgacaagcaggagaaggagcgcgagggcacg
ccgctgttcaacgaccccggcggcacgggcgggtcatggtgcgcgccgttcaagacgtgg
cagcgcgtctacgactacgacatcctgcacgggctgaccgacgacgaggcgcagctggtg
ctgggcggggaggtggcgctgtggtcggagcagtcggacgagacggtgctggacgccagg
ctgtggccgagggccgccgccgccgcggagacgctctggtccggcaacaagggctccaac
gggaagaagcgctacgcgaacgccaccgaccgcctcaacgactggaggcaccggatggtc
gagcgcggcatccgcgccgagcccatccagccgctctggtgctcgctccaccccggcatg
tgcaacctgtcgcagtag

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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