KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0819900-01
Entry
Os03t0819900-01   CDS       T02163                                 
Symbol
Os03g0819900
Name
(RAP-DB) Similar to RAB8C.
  KO
K07901  Ras-related protein Rab-8A
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    Os03t0819900-01 (Os03g0819900)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os03t0819900-01 (Os03g0819900)
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os03t0819900-01 (Os03g0819900)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dosa04147]
    Os03t0819900-01 (Os03g0819900)
   04031 GTP-binding proteins [BR:dosa04031]
    Os03t0819900-01 (Os03g0819900)
Membrane trafficking [BR:dosa04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    Os03t0819900-01 (Os03g0819900)
 Autophagy
  Other autophagy associated proteins
    Os03t0819900-01 (Os03g0819900)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    Os03t0819900-01 (Os03g0819900)
Exosome [BR:dosa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Os03t0819900-01 (Os03g0819900)
  Exosomal proteins of other body fluids (saliva and urine)
   Os03t0819900-01 (Os03g0819900)
  Exosomal proteins of colorectal cancer cells
   Os03t0819900-01 (Os03g0819900)
GTP-binding proteins [BR:dosa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    Os03t0819900-01 (Os03g0819900)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_29 AAA_22 AAA_16
Other DBs
RAP-DB: Os03t0819900-01
Position
chr03:join(34407365..34407437,34408828..34408900,34408986..34409086,34409172..34409237,34409326..34409423,34409740..34409802,34409948..34410040,34410111..34410188)
AA seq 214 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR
LSETDSKPEDRTIKIKSEGEAEAAAAQKSACCGS
NT seq 645 nt   +upstreamnt  +downstreamnt
atggcggcgccgccggctagggctcgggccgactacgattatctcatcaagctgctcctc
attggcgacagcggtgtaggaaaaagttgtctcctcctacggttctcagatggctctttc
acgactagtttcattaccacaattggtattgacttcaagataaggaccgttgagttggat
ggtaaacggattaaattgcaaatctgggatactgctggccaagaacgctttcgaactatt
accactgcttactacaggggagcaatgggcattttactcgtttatgatgtcaccgatgaa
tcttcattcaacaacataagaaattggatcagaaacatcgaacaacatgcctctgataat
gtgaacaaaattttggtggggaacaaagctgatatggatgaaagcaaaagggctgtaccc
acttcaaagggacaggctcttgctgatgaatacggaatcaagttctttgaaacgagtgca
aagacaaacctgaatgttgagcaggttttcttttctatagcaagagatatcaaacaaaga
ctctcagagactgattccaagcctgaggaccgaaccatcaagatcaaatcggaaggggaa
gccgaggcagcggcggctcagaaatcagcttgctgtggatcttag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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