KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0397100-01
Entry
Os04t0397100-01   CDS       T02163                                 
Symbol
Os04g0397100, CLASS_I_CLP_ATPASE_C1, CLPC1
Name
(RAP-DB) Similar to ClpC protease.
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Motif
Pfam: AAA_2 ClpB_D2-small AAA_5 AAA Sigma54_activat UVR Zeta_toxin nSTAND3 DNA_pol3_delta2 AAA_22 Torsin AAA_14 DUF815 AAA_16 AAA_28 AAA_3 T2SSE AAA_23 RsgA_GTPase AAA_18 RNA_helicase
Other DBs
RAP-DB: Os04t0397100-01
Oryzabase: 8946
Position
chr04:complement(join(19603274..19603306,19601814..19602992))
AA seq 403 aa
NEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVS
SWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASF
IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ
LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG
SSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE
VKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLEDSLA
EKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV
NT seq 1212 nt   +upstreamnt  +downstreamnt
aacgaggctgtacgtggccaagattttgaaaaggctggggaattaagagatcgggaaatg
gaattgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaagcagag
actgaatccggtgaagtcggtccccttgttactgaggcagatattcagcatatcgtgtcc
tcttggactggaatacctgtggagaaagtctcatctgatgagtctgaccgtctccttaag
atggaggagacactccatacgcgtatcattggtcaggatgaggctgtcaaagctattagc
cgtgccatccgccgtgctcgtgttggcctcaagaacccaaatcggcctattgctagcttc
atcttctctggaccaactggtgtcggtaaatcagagttagcaaaggctcttgcagcctac
tactttggctcagaagaggccatgatcagactagacatgagtgagttcatggagaggcat
acagtctccaagctcattggatcacctccaggttatgttggttacactgagggtggtcaa
ctgacagaagcagttcgccgccgaccatacactgttgttctcttcgatgagattgaaaag
gcacatcctgatgtcttcaacatgatgcttcagatcttagaagatggaagactaactgac
agcaagggtcggactgttgatttcaagaacacactgttgatcatgacatcaaatgttgga
agcagtgtcattgagaagggaggacggaagattggatttgaccttgactatgatgagaaa
gacaccagctacaataggattaagagcttggtgactgaagagctgaagcagtacttccga
cctgagttcttaaacagattggacgagatgattgtgttccggcagcttaccaagctggag
gttaaggagattgctgatattatgctcaaagaagtgtttgacaggctcaaggcaaaggac
atcgacctccaggtgacagagaagttccgggatagagttgtcgacgaaggttacaaccca
agctatggtgccaggcctctgcggcgtgctattatgaggcttctggaggacagcttggcg
gagaagatgttggctggcgaggtcaaggaaggtgactctgctattgttgatgtggattca
gagggcaaggtgatagttcttaacggtggtagtggtgttccggaaccactggcacctgct
ctgagtgtctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   OC (1)   
   ORYZABASE (1)   
   RAP-DB (1)   
Protein domain (21)   
   Pfam (21)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system