KEGG T02163: Os04t0447400-01

Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0447400-01

Entry

Os04t0447400-01 CDS T02163

Gene name

Os04g0447400

Definition

Similar to Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2).

Orthology

K01580

glutamate decarboxylase [EC:4.1.1.15]

Organism

dosa Oryza sativa japonica (Japanese rice) (RAPDB)

Pathway

dosa00250	Alanine, aspartate and glutamate metabolism
dosa00410	beta-Alanine metabolism
dosa00430	Taurine and hypotaurine metabolism
dosa00650	Butanoate metabolism
dosa01100	Metabolic pathways
dosa01110	Biosynthesis of secondary metabolites

Module

dosa_M00027

GABA (gamma-Aminobutyrate) shunt

Class

Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:dosa00650]
Metabolism; Amino acid metabolism; Alanine, aspartate and glutamate metabolism [PATH:dosa00250]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:dosa00410]
Metabolism; Metabolism of other amino acids; Taurine and hypotaurine metabolism [PATH:dosa00430]

SSDB

Motif

Pfam:

Pyridoxal_deC

Other DBs

RAP-DB:

Os04t0447400-01

UniProt:

Q01J85

Position

chr04:complement(join(22316031..22316318,22315537..22315952,22315187..22315440,22315050..22315102,22314426..22314869))

AA seq 484 aa
MALSTAQTGESMHSSTFASRYVRTALPRFRMPEKSIPKDAAYQIINDELMLDGNPRLNLA
SFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIGDDETAVGV
GTVGSSEAIMLAGLAFKRKWQNRMKAEGKPHDKPNIVTGANVQVCWEKFARYFEVELKEV
KLTQGYYVMNPEKAVEMVDENTICVAAILGSTLNGEFEDVKMLNDLLTAKNAETGWNTPI
HVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPDELI
FHINYLGADQPTFTLNFSKGSNQIIAQYYQLIRLGFEGYKDIMQNCRDNATVLREGIEKT
GHFDVVSKDSGVPLVAFSLKDSSRYTVFEVAESLRRFGWIVPAYTMPADAEHVAVMRVVI
REDFSRGLAERLITDLTKTVADMDAHAVKKAAAEPAKKTVREIEKEVTTYWRSFVARKKS
SLVC

NT seq 1455 nt +upstreamnt +downstreamnt
atggcgctgtcgacggcgcagacaggggagtcgatgcactcctcgacgttcgcgtcgcgg
tacgtgcgcacggcgctgccgaggttcaggatgccggagaagtcgatccccaaggacgcg
gcgtaccagatcatcaacgacgagctgatgctcgacggcaacccgcgcctgaacctggcg
tccttcgtcaccacgtggatggagcccgagtgcgacaagctcatgatggccgccatcaac
aagaactacgtcgacatggatgagtaccccgtcaccaccgagctccagaaccggtgcgtg
aacatgatcgcgcatctgttcaacgcgccgatcggggacgacgagacggcggtcggggtg
ggcacggtggggtcgtcggaggccatcatgctggcggggctggcgttcaagaggaagtgg
cagaacaggatgaaggccgaggggaagccccacgacaagcccaacatcgtgacgggggcc
aacgtgcaggtgtgctgggagaagttcgcgcgctacttcgaggtggagctcaaggaggtg
aagctgacccaagggtactacgtgatgaacccggagaaggccgtggagatggtcgacgag
aacaccatctgcgtcgccgccatcctcggctccaccctcaacggcgagttcgaggacgtc
aagatgctcaacgacctcctcaccgccaagaacgccgagacagggtggaacacgccgatc
catgtggacgcggcgagcggcgggttcatcgcgccgttcatctacccggagctggagtgg
gacttccggctgccgctggtgaagagcatcaacgtcagcggccacaagtacgggctcgtc
tacgccggcgtcgggtgggtcatctggcgcaacaaggaggacctccccgatgagctcatc
ttccacatcaactacctcggcgccgaccagccaaccttcacgctcaacttctccaaagga
tcgaaccagataattgcgcagtattaccagctcattcgtctcggattcgaggggtacaag
gacatcatgcagaactgccgggacaacgcgacggtgctccgggaggggatcgagaagacg
ggccacttcgacgtggtgtccaaggactccggcgtgccgctggtggccttctccctcaag
gactcgtcgcggtacacggtgttcgaggtggccgagagcctccgccgcttcggctggatc
gtgccggcgtacaccatgcccgccgacgctgagcacgtcgccgtgatgcgcgtcgtcatc
cgcgaggacttcagccgcggcctcgccgagcgcctcatcaccgacctcaccaagacggtg
gccgatatggacgcccacgccgtcaagaaggccgccgccgagccggccaagaagaccgtg
cgggagatagagaaggaggtgaccacctactggcggagtttcgtcgccaggaagaagagc
agcctcgtctgctga

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

Download RDF

DBGET integrated database retrieval system