KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0508200-01Help
Entry
Os04t0508200-01   CDS       T02163                                 
Gene name
Os04g0508200
Definition
Isocitrate/isopropylmalate dehydrogenase domain containing protein.
Orthology
K00031  
isocitrate dehydrogenase [EC:1.1.1.42]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
Citrate cycle (TCA cycle)
Glutathione metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids
Peroxisome
Module
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Class
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:dosa00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:dosa00480]
Cellular Processes; Transport and catabolism; Peroxisome [PATH:dosa04146]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
RAP-DB: 
UniProt: 
Position
chr04:join(25389698..25389938,25390056..25390099,25390193..25390302,25391399..25391436,25392038..25392115,25392521..25392574,25392656..25392757,25392846..25392931,25393037..25393140,25393555..25393623,25393704..25393819,25393956..25393990,25394081..25394223,25394377..25394499,25395032..25395125)
AA seq 478 aa AA seqDB search
MRHLLLLRCGMAPLYGSSSSAAATKALLLNPAAAHAFVPSSPGPRALRRGGASLRCYAAA
AAAVAEQHRIKVHNPIVEMDGDEMTRVIWKMIKDKLIFPYLELDVKYFDLGLLNRDATDD
KVTVESAEATLEYNVAVKCATITPDETRVKEFKLKSMWRSPNGTIRNILNGTVFREPILC
KNVPRILSGWKKPICIGRHAFGDQYRATDTIINGPGKLKMVFVPDGAEPVELNVYNFKGP
GVALSMYNVDESIRAFAESSMAMALSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEEKWK
EKFEENSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMSSVLL
SSDGKTLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDKNDRLLDFT
KKLESACIETVESGKMTKDLALLIHGPKVTREFYLNTEEFIDAVAQQLREKIQIPAVV
NT seq 1437 nt NT seq  +upstreamnt  +downstreamnt
atgcgccacctgctgctcctgcgctgcggcatggctcctctctacggctcctcctcctcc
gccgccgcgaccaaagccctcctcttaaaccccgccgccgcgcacgccttcgtcccttct
tcccccggaccccgcgcgctccgccgcggcggcgcctccctccgctgctatgccgccgcc
gccgcggcggtggccgagcagcaccgcatcaaggtccacaaccccatcgtcgagatggac
ggtgacgagatgacgcgggtcatttggaagatgataaaggataagctcatcttcccttac
ctggagctggatgtcaagtatttcgaccttgggctgctcaaccgggatgccaccgatgat
aaggtcactgttgagagtgccgaggctacgttggagtataatgttgctgttaagtgtgct
accattacacctgatgaaacaagagttaaagagttcaaactcaagtcaatgtggaggagc
ccaaatggcaccatcaggaatattctaaatggaactgttttccgggagcccatcttgtgt
aaaaatgtaccacggatactttctggctggaagaagcccatttgcattggaaggcatgca
tttggagaccagtatcgagctactgatacaataattaatggtccaggaaagcttaaaatg
gtttttgtcccagatggtgctgaacctgtggagttaaatgtttataattttaaagggcct
ggtgtggctttatcaatgtataatgtggatgagtctattagagcttttgctgagtcatca
atggcaatggcactttccaaaaaatggcctctttatctcagcaccaagaacacaatattg
aagaaatatgatggcaggttcaaggacatcttccaggaggtatatgaagagaaatggaag
gagaagttcgaggaaaactcgatatggtatgagcaccggttgattgatgacatggtggca
tatgctgtgaaaagtgaaggtggatatgtttgggcttgcaaaaactatgatggagatgtt
cagagtgacttccttgcccaaggttttggttccttgggtttgatgtcatctgttttgtta
tcttctgatgggaaaacgttagaagctgaggcagctcatgggactgtcactagacatttc
aggctacatcagaagggacaggagacaagtacaaatagcattgcttctatatttgcttgg
actcgtggactagaacatagagcaaagctggataaaaatgataggctgctggatttcaca
aagaaacttgaatctgcatgtattgaaacagttgaatcggggaagatgacaaaggatctt
gcactccttatccatggccccaaggtaacaagggagttctaccttaacaccgaagaattc
attgacgctgtggctcagcaactgcgagaaaagattcaaataccagctgtggtttaa
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