KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0680550-00
Entry
Os04t0680550-00   CDS       T02163                                 
Symbol
Os04g0680550
Name
(RAP-DB) Similar to Tyrosyl-tRNA synthetase.
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Os04t0680550-00 (Os04g0680550)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dosa01007]
    Os04t0680550-00 (Os04g0680550)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dosa03016]
    Os04t0680550-00 (Os04g0680550)
   03029 Mitochondrial biogenesis [BR:dosa03029]
    Os04t0680550-00 (Os04g0680550)
Enzymes [BR:dosa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     Os04t0680550-00 (Os04g0680550)
Amino acid related enzymes [BR:dosa01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   Os04t0680550-00 (Os04g0680550)
Transfer RNA biogenesis [BR:dosa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Os04t0680550-00 (Os04g0680550)
 Prokaryotic type
    Os04t0680550-00 (Os04g0680550)
Mitochondrial biogenesis [BR:dosa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Os04t0680550-00 (Os04g0680550)
SSDB
Motif
Pfam: tRNA-synt_1b
Other DBs
RAP-DB: Os04t0680550-00
Position
chr04:complement(join(34749614..34749766,34748813..34749096,34748594..34748690,34748071..34748182,34747796..34747878,34746827..34746972,34746534..34746657))
AA seq 332 aa
MEMGFDEKFALLRSIAEECICEDELRVLLKKKPNPICCVWFEPTSMMGIEQGIMKTIYVN
KMVRAGCTVKILIADWFPQRNPRFTCNLNKIQAIIRYNIMMWKAVGMHLDKVEIIWFSDE
LNHHAVDYWPFAMDVSRKYTMKRMASYCKYVEPYGPGILPAAQIIYPCMLVSAVLCHKLQ
ADIWLFSMDLRDIVMLTRDYCEDTNRGNIPTIFLHSVLPNLLENPEFQNRRNPGRTIFML
DDEDDIEEKISCAFCPSRVVACNPCLEYIKSVVLPWFGKFEVVQKEGNGSNKTYSSMKEL
IADYESGDLDSFDVKLALGKAINDILEVALVY
NT seq 999 nt   +upstreamnt  +downstreamnt
atggagatgggatttgatgagaaatttgcacttctgaggagcattgcggaggagtgcata
tgcgaggatgagctacgcgtattactgaagaagaagcctaatcccatctgctgtgtttgg
tttgagccaacctccatgatgggcatagagcagggtattatgaagacaatctatgtcaac
aaaatggttagagctggctgtacagttaaaatattgatagcagattggtttccgcagcgg
aaccctagattcacctgtaacctaaacaaaatacaggctattatccgctacaatatcatg
atgtggaaggcagttggcatgcaccttgacaaagtagagatcatatggttttctgatgaa
ttgaatcatcacgctgtcgactactggccatttgctatggatgtttccagaaaatacacc
atgaaaagaatggcaagttattgtaagtatgtggaaccatatgggccaggaatacttcct
gctgcccagataatttacccttgcatgctggtttctgctgtattatgccacaagttgcag
gcagacatatggctattcagcatggatctgcgagacattgtcatgctaactagagattat
tgtgaagatacaaataggggaaacataccaactattttcctgcactctgtgctacctaat
ttactagaaaaccccgaattccagaatagaagaaatcctggacggactatcttcatgcta
gatgatgaggatgatatagaagaaaaaataagttgtgctttctgcccttcgagagtagta
gcatgcaacccatgtttggagtatataaaatctgttgtccttccttggtttgggaagttt
gaggtcgttcagaaggaagggaatggtagcaacaagacatattcaagcatgaaggaactt
attgctgattatgaaagtggcgatcttgactcttttgatgtcaagttggcactgggaaaa
gcaataaatgacatattagaggtagctcttgtttattga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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