KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0509500-01
Entry
Os05t0509500-01   CDS       T02163                                 
Symbol
Os05g0509500
Name
(RAP-DB) Similar to Signal recognition particle 54 kDa protein 2 (SRP54).
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03060  Protein export
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Os05t0509500-01 (Os05g0509500)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dosa02044]
    Os05t0509500-01 (Os05g0509500)
Enzymes [BR:dosa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Os05t0509500-01 (Os05g0509500)
Secretion system [BR:dosa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Os05t0509500-01 (Os05g0509500)
  Eukaryotic Sec-SRP protein
   Os05t0509500-01 (Os05g0509500)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW AAA_33 AAA_17 AAA_22 MMR_HSR1 Zeta_toxin CLP1_P AAA_16 AAA_19 ResIII AAA ATP_bind_1 nSTAND3 DO-GTPase2 vWA-TerF-like APS_kinase DUF373 Dynamin_N
Other DBs
RAP-DB: Os05t0509500-01
Position
chr05:complement(join(25232758..25232988,25232534..25232633,25231641..25231794,25231401..25231551,25231158..25231306,25230894..25230994,25230659..25230816,25230409..25230523,25230037..25230329))
AA seq 483 aa
MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAV
NLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTK
YAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFR
KEKSDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA
SVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGDL
SGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYELFQNLLNMGPIGQVLSMIPGFRSEL
MPKGHDKESQAKIKRYMTIMDSMTNAELDSTNPKLMSESRIKRVARGSGRTMKDVTDMLE
EYKRIAKVCSKLKKKLPKNMDRNVMNNKDTLNTINNLIPKQLLNQIGGVNPLQSVMKQMG
LKT
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggtgctcgcgcagctgggcgggagcatctcccgcgcgctggcgcagatgagcaacgcg
acggtgatcgacgacaaggcgttcgccgactgcctccacgagatcgcgcgcgcgctcctg
cagtccgacgtgcagatcaggatggtctccgacatgcgcgccaacatccggagggccgtc
aacctcgacgccctccccgccggcaccaacaagcgccgcatcatacagcaggccgtcttc
gcggagctctgcaacatgcttgatccggggaagccgtccttcacccccaccaaggggaag
cccagtgtggtcatgttcgtcggcttgcaaggttctgggaaaaccactacctgtaccaaa
tatgctcactatcatcagctgaagggctttaaaccttcattggtttgtgctgatacattc
agagctggtgcctttgatcagttaaaacagaatgctacaaaggccaagattccttactat
ggaagctacatggaatcagacccagtgaaaattgctgttgagggtgtggagaggttcagg
aaggagaagtctgatctcatcattgttgatactagcgggcgccacaagcaagaggctgca
ctcttcgaagaaatgcgtcaagttgcagaagcaacgaaacctgaccttgtgatattcgtg
atggatggtagcattggtcaggcagcgtttgatcaggcgcaagcatttaaacagagtgct
tctgttggtgctgtgattgttacgaaattggatggtcatgccaaaggaggcggtgcactt
agcgcggttgcagctacaaagagccctgttgtatttattggaactggagaacacatgcag
gattttgaggttttcgatgtgaaaccatttgttagtcgtctgttaggaatgggagacttg
tctggcttagtgaacaagatcaaagatgctatgcctgctgatcaacaacctgagcttatg
cagagactgatagaaggaacctttactctcagagtattctacgagctgttccagaatctt
cttaacatgggtcctattggacaggttttatctatgatacctggatttaggtctgaactg
atgccaaaaggacatgacaaggaaagccaagcaaagattaagcggtacatgactattatg
gattctatgacaaatgcagagcttgatagcacaaacccaaagctgatgagtgaatcacga
attaaacgggtcgctcgaggatctggcaggaccatgaaagatgtgaccgacatgctggaa
gagtacaagagaatcgccaaggtgtgtagcaagttgaagaagaagttgcccaagaatatg
gacaggaatgttatgaacaacaaggacacgctgaacaccattaacaatctcatccctaag
caattgttgaatcagatcggtggtgttaatccgttgcagagcgtcatgaagcaaatgggc
ttaaagacatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

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