KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0592500-01
Entry
Os05t0592500-01   CDS       T02163                                 
Symbol
Os05g0592500
Name
(RAP-DB) SIT4 phosphatase-associated protein family protein.
  KO
K15501  serine/threonine-protein phosphatase 6 regulatory subunit 3
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dosa01009]
    Os05t0592500-01 (Os05g0592500)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os05t0592500-01 (Os05g0592500)
Protein phosphatases and associated proteins [BR:dosa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-6
    Regulatory subunits
     Os05t0592500-01 (Os05g0592500)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Protein phosphatase 6
     Os05t0592500-01 (Os05g0592500)
SSDB
Motif
Pfam: SAPS XLF
Other DBs
RAP-DB: Os05t0592500-01
Position
chr05:join(29520454..29520492,29521551..29521654,29522020..29522106,29522196..29522271,29522387..29522461,29522625..29522678,29523158..29523217,29523302..29523418,29523592..29523686,29523805..29524007,29524204..29524301,29524683..29524786,29524862..29525027,29525128..29525250,29525372..29525454,29525542..29525683,29525848..29525874,29526109..29526179,29526255..29526843)
AA seq 770 aa
MFWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNTRLINFLRDKAQVEQLLR
YIVEEVPEDSEKKRSFKFPFIACEIFTCEIDIILRTLVEDEELMDLLFSFVRPGHPHSTL
LAGYFSKVVICLMLRKTSPLMNYVQEHPDIVVHLVDLIGTTSIMEVLIRLIGADETIYSN
YADTLQWLENTDVLEMIVDKFSSSDSPEVHANAAEILSAVTRCAPPALAAKICSPSFVGR
LFRHALQESRPKSVLVHSLSVCISLLDPKRLASASYQAFRSNLSHGTLVTASPETVDGML
ESLGDLLKLLDISSAENVLPTTYGCLQPPLGKHRLKIVEFISVLLTIGSETAEQELINQS
AVKRSIDLFFQYPYNNFLHHHVESIIISCLEVNRSQLIDHALNECNLVGKILAAERSSSL
STESNTPTLLSEGKVPPKIGNIGHITRIANKLIQLGNSNSIIQSHLQENSEWVEWQTTAL
VKRNEVENVYHWACGRPTSLHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGMYSNDDI
EEAQVIERDDEDVYFDDESAEVVISSLRLGDDQDSSSLFTNSNWFTFDGDRGINDRLAAS
VPSSSPNSEETSLNTEETDEVQIGEDTSIEPQLESVSLENGPVEEAGDLADVSKQTDSNT
EDEKLLCTEEEDLSKEAEESERHVDVRDGQVDIQAEDAAEGSCGDMGTGIAVDEPVSPSS
EPNNASAGASPDTGDIHTAGSTGSNDSGAELHAKEDSQDGQKTDEPTTTE
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgttctggcgcatgactggtctctccgcggcctcgccggtggatacaattctagacaag
gagaacttcacattagaagaacttcttgacgaggatgaaataattcaggagtgcaaagcg
ctgaatactcgtctcataaatttcttgcgagacaaggctcaagtggagcaattgcttcgt
tacatcgtggaagaagtaccagaagattctgaaaagaaacgttcttttaagttcccattc
attgcttgtgagatatttacctgtgaaattgacatcatcttgaggaccttagtagaggat
gaagagttaatggatttgcttttctcatttgtaagacctggtcatccacatagcacattg
ttagctggatacttcagtaaggtggtaatatgtttgatgctgagaaagacttcccctcta
atgaactatgtccaggagcacccagacattgttgtccatcttgttgatctcatcggcacc
acctcaataatggaggttctgattcgactgataggtgctgatgagaccatatactcgaat
tatgctgacacattgcagtggttagaaaatacagatgtactggaaatgattgtggataaa
tttagctcatctgattcccctgaagtacacgccaatgctgcagaaattctttctgcagtg
actcgatgcgcccctcctgctctcgctgcaaaaatatgcagcccaagttttgttgggaga
ttatttcgtcatgctcttcaagaatcacgccccaaatctgtcctggttcattcattatca
gtatgtatatctttgttggatccaaaaagactagcgtcagcctcataccaagcatttaga
agtaacttgagccatgggacattggttactgctagtccagagacagttgatggtatgctg
gagagcctaggtgatttgctgaagttgttggatatttcttctgctgaaaatgttttacct
acaacatatggatgtttgcagccccctcttggaaaacaccgcttgaagattgtggaattc
atctctgttttgctgacgattggtagtgaaactgcggaacaggagctaatcaaccaatct
gcagtaaaacgttccattgatttgttcttccagtacccttacaataactttctgcaccat
catgtcgagagtattatcatttcttgtctggaagttaatagatcccagctgattgaccat
gcccttaatgaatgcaatcttgttggcaaaattcttgctgctgaaagaagttcctccctg
tcaacagaatctaacacaccaacattactatctgaagggaaggtgcctccaaaaattggg
aatattgggcacataactcgaatagctaataagcttattcaactgggaaatagcaacagc
ataatccagtctcatttgcaggagaacagcgagtgggttgaatggcagacaactgccctg
gtcaaacgcaatgaggttgagaacgtttatcattgggcctgtggtcgtccgacttctcta
catgatcgtggtagggatagcgatgatgatgacttccgagacagggactatgatgtggcg
gcacttgctaataacctgagccaggcattccggtatggaatgtacagcaatgatgacatt
gaagaggcacaagtaattgaacgagatgatgaggatgtctactttgatgatgaatcagct
gaagtagtaatatcttcgttgcgtttgggtgatgatcaggacagcagctccctctttacg
aattcaaactggtttacctttgatggtgatagaggaataaatgaccgtttagctgcctct
gtcccttcttcatctcccaattctgaagaaacttctctaaacacggaggaaactgatgag
gtgcaaattggtgaggacactagcatcgagccacaactggaaagtgtctctcttgaaaat
ggccctgttgaggaggccggggacttagcagatgtaagtaaacaaacagattctaacacg
gaagacgagaaactattgtgcactgaagaggaagatttgtccaaagaagctgaagaatct
gagcgacacgtggatgttcgagatggccaggtagacatacaggcagaagatgcagctgaa
ggatcatgcggggatatgggtacagggatagcagtggatgaacctgtcagcccatcatct
gagcccaacaatgcttcggctggagcttcaccagacacaggtgatatccatactgctggc
tcaactggatccaacgattcaggtgcagagttgcatgccaaggaagattcacaggatgga
cagaaaactgatgagcccacaacaacagagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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