KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0243866-00
Entry
Os08t0243866-00   CDS       T02163                                 
Symbol
Os08g0243866
Name
(RAP-DB) Similar to chromatin remodeling complex subunit.
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Os08t0243866-00 (Os08g0243866)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os08t0243866-00 (Os08g0243866)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     Os08t0243866-00 (Os08g0243866)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII Methyltransf_19
Other DBs
RAP-DB: Os08t0243866-00
Position
chr08:complement(join(8792237..8792452,8789863..8791587))
AA seq 646 aa
NHKIHAFEVNLCLVCILIICFGQLDTSEVNNKKQLDNCNHDIHVYEDLGHVCHECGLVVR
KADSLFHYQWKKASRKRTNVNEVCLKKVGSDAISLSEDFIFSDIAIHPRHAKNIRPHQLE
GFKFLVNNLVTDEPGGCILVHAPGSGEIFMLISFIQGFMARHFTARPLVVLPEGILGTWK
REFQQWQVEDIPLYDFDSIKADNRVEQLEVLKSWSSKRSILFVGSKHFTQIVCDDRDENA
VAECRDTLLMVPSLLILDEGHTPSIDETDMLQSARKVQTPCKVVMSGTLFHNHVKEVFNT
LDLVRPGFLKTETFWPIVTRMMGQLEISSARSITEISESMEDTLLNDDNFTRKVNVIRSL
GELTKDVLHYCKGEDLNEFPVLLDFSVFLELSPKQKDILCKLEEDHGMLKTSAVGAALYV
HPCLSEISEANDVDRDDRVDSLVNSINLGDGVKARFFLNILALANSAGEKLVAFSQYTLP
MKFLERLLVKEMGWHVGKEIFVINGDTSMEDGQLAMDQFNGSADAKVLFGSIKAFGEGIS
LVGASRIVILDVHLNPSVTRQAIGSTFRPGQKKKVFVYRLVAADSPEEKAHETAFNKEVI
PKLWFQWSGRCTTEDFKLNQVCIDGSRDELLETDVIRQDIKALYQR
NT seq 1941 nt   +upstreamnt  +downstreamnt
aaccacaaaatacatgcttttgaagtcaatctttgtttagtttgtattctaattatatgt
tttggacagctcgacacatcagaagtgaataataaaaaacagttggacaattgcaaccac
gatattcatgtttatgaagatctgggccatgtatgccatgaatgtggtttggtcgtgagg
aaagctgactcattatttcactatcagtggaaaaaggcttcaaggaaaagaacaaatgtg
aatgaggtttgcttgaagaaggtaggctctgatgctattagtctctctgaagatttcata
ttttcagatattgccattcatccaagacatgccaagaatatccggcctcatcagttggaa
ggattcaaattcctggttaataacttggtcactgatgaacctggaggctgcattcttgtt
catgccccaggttcaggggaaatatttatgcttatcagtttcattcaaggcttcatggca
agacatttcactgcaaggccccttgttgtgcttcctgaagggatattaggtacatggaag
agagaattccagcagtggcaagtggaggacataccactgtatgatttcgattctattaag
gctgacaatagagtagagcaactggaagtcctaaaatcttggagctctaagaggagcata
ctctttgttggatccaagcatttcacccaaattgtctgcgatgatagggatgaaaatgct
gtagctgaatgcagggacacgcttcttatggtccccagcttgttgatacttgatgagggc
catacacctagcattgatgagactgatatgctacaatctgcgcgcaaagtgcaaacgcca
tgcaaagtggtcatgtctggtacactcttccataatcatgtcaaggaagtgtttaacacc
ttggatcttgtacgcccaggttttctcaagacggagacattctggcccattgttacacgt
atgatgggtcaactagaaatatcaagtgccaggagtataacagagatctctgagtcaatg
gaagataccctgctgaatgatgataacttcacaagaaaagttaatgttatcagaagtctt
ggagaactaaccaaagatgtgcttcactactgtaagggtgaggacttgaatgaatttcct
gtcttactagacttcagtgtgttcttggaactcagtcccaagcagaaagacattctttgc
aagttagaagaagaccatgggatgctcaaaacaagcgctgtaggggctgcactctatgtt
cacccttgcctttcagaaatttctgaagctaatgatgttgatagggatgacagagttgat
agtttggtcaacagcatcaacctgggagatggggtgaaggccaggttttttctgaacatc
cttgcgcttgccaactctgcaggagagaaattagttgcttttagtcagtatacactcccc
atgaaatttttggaaaggctgctggttaaggagatgggctggcatgtagggaaggaaatt
tttgtgataaatggtgatactagcatggaagatggacaattggcaatggatcagttcaac
ggctctgccgatgcaaaagttctgtttggttccatcaaggcatttggggagggcatctcc
cttgtgggtgcatcaagaattgtcatcctagatgttcacctgaacccgtctgttacgcgc
caagccatcgggagcacattcaggcctggacagaagaagaaagtgtttgtgtatagactt
gtagctgctgattctccagaggagaaggcccatgaaactgcattcaacaaggaagtcata
ccaaagctatggttccaatggagcgggcgctgcacaactgaagacttcaagctgaatcaa
gtctgtatcgatggctccagagatgaattgttggagactgatgttattcgtcaggatatc
aaggctttgtatcaaaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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