KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0246200-01
Entry
Os09t0246200-01   CDS       T02163                                 
Symbol
Os09g0246200
Name
(RAP-DB) Similar to DNA-directed RNA polymerase.
  KO
K10908  DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:dosa03029]
    Os09t0246200-01 (Os09g0246200)
Enzymes [BR:dosa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Os09t0246200-01 (Os09g0246200)
Mitochondrial biogenesis [BR:dosa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial RNA polymerase
    Os09t0246200-01 (Os09g0246200)
SSDB
Motif
Pfam: RNA_pol RPOL_N
Other DBs
RAP-DB: Os09t0246200-01
Position
chr09:complement(join(3466815..3467708,3465674..3465889,3465452..3465585,3465301..3465367,3465144..3465202,3464780..3464897,3463967..3464080,3463717..3463848,3463225..3463641,3462431..3462481,3462239..3462309,3459883..3459967,3459189..3459341,3459007..3459081,3458707..3458796,3458532..3458579,3457636..3457750,3456706..3456722))
AA seq 951 aa
MPSSPTPATAPISCSPSPPLHLHLTARRQTLAPPMWRRLPARRLASALLSSSAPLPHPLH
RSLLLLLPAASQRLAPSQTLPRFASSSAAVAAESVSSEEVDELHHAIGEIARGDPSVSAP
APAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAML
RRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELV
GERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVR
IHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNS
KPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRR
YGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQR
DAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEK
PDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGR
AYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFT
ENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGS
CNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARA
RLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTL
TALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL
TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAVVGEL
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgccctcctccccaactccggccaccgcaccaatctcgtgttcgccatctcctcctctc
cacctccacctcaccgcccgccgccaaaccctagcgccccccatgtggcgccgcctcccc
gcccgccgcctcgcctccgccctcctctcctcctccgccccgctgccccaccctctccac
cgcagcctcctcctcctcctccctgccgcctcacagcgtctcgcgccgtcgcagacgctg
ccgcggttcgcgtcctcctccgccgccgtcgccgccgagtccgtctcctccgaggaggtc
gacgagttgcaccacgcgatcggggagatcgcccgcggggacccgagcgtctccgccccg
gctccggcggcggggcaggaggggcataggaggaggtccgggagagggaagcactcggcc
gaggctatggcggttccggcggcggggcaggaggggcataggaggaggtccgggagaggg
aagcactcggccgaggctatggcggtgcacggggtcgggtaccacaagtatgcgatgctg
cgccggcggcagatccagattgagacggaggcgtgggagcaggccgccgaggagtaccgc
gagctgcttgctgacatgtgccagcagaagctggcgcccaacctgccctatgtcaagtcg
ctctttcttggctggttcgagccactgcgagaccagatcattgccgagcaggagctcgtg
ggtgagcgcggcgcgcgggcctcccatgcccgctatttcaacatgctcccggctgatatg
atggccgtcatcaccatgcacaagctcatgggtctactcatgaccggtagcggcgatgga
agtgtccgagtcatccaggctgcgtgccagatcggcgaggcaatagaacatgaggttcga
atccacaaatttctagagaagacaaagaaaaaaagcaataaagaaatggataatgaagaa
gaaggaggtgattcagacattgccaaagaacaagagcgtctaagaaagaaagtcactgat
ctgatgaaaaagcaaaaaatacggcaagtaagaaatatagtaaagaagcaagataactcc
aagccatggggtcaagatgctcatgcaaaagttggtagtcgtttaattgagcttatgatt
gagacagcctacatacaaccacctgctagccaatcagcagatggtccacctgatatccgt
cctgctttcacacatgaaatgagaactgtggcaagagagcaacagaagagtagtcggcga
tatggtgtgatcaagtgtgatccgctggtccggcaagggcttgatagaacagcaaagcat
atggtcataccttatatgcctatgttaattccgcctatcagttggactgggtatgacaag
ggtgcacatttatttttaccatcctatgtgatgcgcacccatggagctagacaacagaga
gatgctgtcagaagagctccaagggaacaaatgcaatctgtgtttgaggccttaaatact
cttgggagcaccaagtggagggttaacaaaagagttcttagtattgtcgacagaatatgg
tcaagtggtggccggcttgctgacttggtcgatcgcactgatgttgctttaccagagaag
cctgacacagaagatgaagacaagttgaagaaatggagatggaccttgagagcagccaag
aaggaaaatagtgaaaggcactcccagagatgtgatgtagaactaaaacttgccgtagct
cgcaaaatgaaggatgaagatggtttctactatccacacaaccttgattttagaggccgt
gcttatccaatgcatccttacctgaaccacttgggttcagatctttgccgtggagttttg
gagtttgcagaaggtcgtccgcttggtaaatcaggcttgcgctggctaaagatacatcta
gcaaatttatatgctggtggtgttgacaagttatcgtatgatggccgaattgcattcacg
gagaatcacttggaggacatatttgactcagctgatagacctcttgaaggcaaacgatgg
tggcttggagctgaggatccattccaatgccttgcagtgtgcataaatctcactgaagct
ttaagaagcccctcaccagaaacgatgatctcacatattcctgtgcatcaggatggttct
tgtaatggcctgcagcactatgctgctcttggaagggataagttgggagccattgctgtg
aacttagttgccggggagaagcctgcagatgtttatactggaatagctaccagggtggtg
gaaattatgaagaacgatgcgctaaaagatcctgctacagatcctgatgcagcacgcgca
cgtctgctacttgatcaggttgacaggaaattggtaaagcaaactgtgatgacatctgtg
tatggtgtcacttatgttggagcacgtgagcaaataaaaagaagattaaaggagagagac
atgatttgtgatgattcagaactttttagtgcatcatgctatgctgctaaggttactctg
acagcacttggtgagatgttccaagctgcccgcagcattatgaactggcttggtgactgt
gccaaggtaattgcttgtgaaaatgaacctgtgagatggacaacccctcttggactccca
gttgttcaaccatatcgcaagcttgggaggcatcttattaaaacatcattacaagtcctg
actcttcaacgtgaaacagataaggttatggtgaagcggcagaggactgcttttcctcca
aatttcgtgcactcccttgacggttctcatatgatgatgaccgctgttgcttgcaaaagg
caaggactaaattttgcagttgttggagagctttga

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