KEGG T02163: Os12t0489100-01

Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0489100-01

Entry

Os12t0489100-01 CDS T02163

Gene name

Os12g0489100

Definition

Similar to Ubiquitin-specific protease 12.

Orthology

K11838

ubiquitin carboxyl-terminal hydrolase 7 [EC:3.1.2.15]

Organism

dosa Oryza sativa japonica (Japanese rice) (RAPDB)

Class

SSDB

Motif

Pfam:

UCH UCH_1 MATH

Other DBs

RAP-DB:

Os12t0489100-01

UniProt:

Q2R2A3

Position

chr12:join(18334846..18334875,18335139..18335232,18335388..18335538,18335642..18335799,18337798..18338063,18338143..18338361,18338427..18338535,18338606..18338721,18339053..18339151,18340565..18340674,18341111..18341185,18342046..18342124,18342245..18342391)

AA seq 551 aa
MTMMTPPPIEQQQQEDEEMLVPHQELPAAAAVVADAVQPMEVVAQTEPANAAESQPPEDP
QTSRFTWTIENFTRINGKKHYSEPFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSVNLPY
GWNRYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDT
VVVEAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPT
TENDMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEK
LEDKMKETVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCSDVYASFDK
YVEVERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYE
FPLQLDLDRDDGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFD
DERVTKEDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCN
VDEKDIAEHLR

NT seq 1653 nt +upstreamnt +downstreamnt
atgactatgatgactcctccccccatcgagcagcagcagcaggaggacgaggagatgctc
gtgccgcaccaggagctccccgccgccgccgctgtcgtcgccgacgccgtgcagccgatg
gaagttgtggcgcagacagagcctgccaacgcggcagagagccagccgccggaggacccg
cagacgtcgcggttcacgtggacgatcgagaacttcaccaggatcaacgggaagaagcac
tactcggagccgtttgttgttggaggattcaaatggcgtgtgctgattttccctaagggg
aacaatgtggaccatttctctatgtatttggatgtcgcggactcggtgaatctcccttat
ggatggaaccggtatgctcagttcagcttggctgttgtgaaccagatccatccgaagtat
accattcggaaagatactcaacatcaatttaatgcacgtgagagtgactggggtttcaca
tcttttatgcctttgagtgatctgtatgacccaagtaggggctaccttgttaatgacacc
gttgttgtggaagctgaggttgctgttcgcagaatggttgattactggacttatgactcg
aaaaaggaaacaggatatgttggtctaaagaatcaaggagctacctgttatatgaactct
cttctacaaacactgtaccatataccatatttcaggaaggctgtatatcatatgccaact
actgagaatgacatgccatctgggagtattcctttagccctgcagagccttttttacaag
ctccaatacagcgacaatagcgtagctacaaaggagttgaccaaatcttttggatgggac
acttatgattctttcatgcagcatgatgttcaagagcttaacagagttctttgtgagaaa
cttgaagacaaaatgaaggaaactgttgtggaaggaacaattgaacaattatttgaaggc
caccacataaactatatcgagtgcattaatgttgattataaatctaacagaaaagaatcc
ttttatgatctacagcttgatgtcaaaggttgtagtgatgtttatgcatcatttgataaa
tatgtcgaagtggagcgtctagagggtgataacaaatatcatgcagagcagtatggctta
caggatgcaaagaagggagtactcttccttgatttccctcctgttttgcaacttcaactg
aagcgttttgaatatgattacatgcgagatacaatggtcaagattaatgaccggtatgag
ttcccacttcaacttgatcttgacagagatgatgggaaatatcttgctcctgatgcagat
agaagcattagaaacctttacactcttcacagtgttcttgttcatagcggaggagtacat
ggcggtcactactatgctttcatacggcctacgctatcagaccagtggtataaatttgat
gatgaacgagtaacaaaagaagataccaaaaaagcccttgaagagcagtatgggggtgaa
gaagagttgcctcaaataaaccctggtttcaataacaccccatttaaattcacaaagtat
tcgaatgcctacatgcttgtctatattcgtgagagcgacaaggataaaataatgtgtaat
gttgatgaaaaggacatcgctgagcatttgcgg

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

Download RDF

DBGET integrated database retrieval system